RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 LINC00846Q9NV44 126 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 HECTD4Q9Y4D8 3996 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 STAB1Q9NY15 2570 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 FMN2Q9NZ56 1722 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 COL4A6Q14031 1691 aa-0.33□□□□□ -2.46
COPS3-206ENST00000471414 FLNAP21333 2647 aaKnown RBP-0.34□□□□□ -2.46
COPS3-206ENST00000471414 SYS1-DBNDD2H3BUS1 97 aa-0.34□□□□□ -2.46
COPS3-206ENST00000471414 DCHS2Q6V1P9 2916 aa-0.34□□□□□ -2.46
COPS3-206ENST00000471414 GTF2H5Q6ZYL4 71 aa-0.34□□□□□ -2.46
COPS3-206ENST00000471414 DEFB105AQ8NG35 78 aa-0.34□□□□□ -2.46
COPS3-206ENST00000471414 USMG5Q96IX5 58 aa-0.34□□□□□ -2.46
COPS3-206ENST00000471414 PLEKHH2Q8IVE3 1493 aa-0.35□□□□□ -2.46
COPS3-206ENST00000471414 NLRP1Q9C000 1473 aa-0.35□□□□□ -2.46
COPS3-206ENST00000471414 COX8AP10176 69 aa-0.35□□□□□ -2.47
COPS3-206ENST00000471414 PAPPA2Q9BXP8 1791 aa-0.35□□□□□ -2.47
COPS3-206ENST00000471414 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
COPS3-206ENST00000471414 hADV29S1A0JD25 119 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 TMEM262E9PQX1 116 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 SEC11AP67812 179 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 HSD52Q0P140 79 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 KLK9Q2XQG4 91 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 CGREF1Q99674 301 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 MUC2Q02817 5179 aa-0.36□□□□□ -2.47
COPS3-206ENST00000471414 MARF1Q9Y4F3 1742 aaKnown RBP-0.36□□□□□ -2.47
COPS3-206ENST00000471414 SPTA1P02549 2419 aa-0.37□□□□□ -2.47
COPS3-206ENST00000471414 EP300Q09472 2414 aaPredicted RBP-0.37□□□□□ -2.47
COPS3-206ENST00000471414 MAP1BP46821 2468 aaKnown RBP-0.37□□□□□ -2.47
COPS3-206ENST00000471414 PRKDCP78527 4128 aaKnown RBP-0.37□□□□□ -2.47
COPS3-206ENST00000471414 IQSEC2Q5JU85 1478 aa-0.37□□□□□ -2.47
COPS3-206ENST00000471414 ABCC5O15440 1437 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 ZFYVE16Q7Z3T8 1539 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 APC2O95996 2303 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 ATRQ13535 2644 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 A0A087WVE0 104 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 C20orf202A1L168 122 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 M0R2T5 61 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 CCDC141Q6ZP82 1450 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 URB1O60287 2271 aaKnown RBP-0.38□□□□□ -2.47
COPS3-206ENST00000471414 ANKRD36A6QL64 1941 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 KNDC1Q76NI1 1749 aa-0.38□□□□□ -2.47
COPS3-206ENST00000471414 SHPRHQ149N8 1683 aa-0.39□□□□□ -2.47
COPS3-206ENST00000471414 A0A1B0GU69 56 aa-0.39□□□□□ -2.47
COPS3-206ENST00000471414 C7orf77A4D0Y5 90 aa-0.39□□□□□ -2.47
COPS3-206ENST00000471414 VAMP8Q9BV40 100 aa-0.39□□□□□ -2.47
COPS3-206ENST00000471414 TARBP1Q13395 1621 aaKnown RBP-0.39□□□□□ -2.47
COPS3-206ENST00000471414 NCOA3Q9Y6Q9 1424 aa-0.39□□□□□ -2.47
COPS3-206ENST00000471414 KIAA1551Q9HCM1 1747 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 CPSF4LA6NMK7 179 aaKnown RBP-0.4□□□□□ -2.47
COPS3-206ENST00000471414 NDUFC1O43677 76 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 C6orf201Q7Z4U5 140 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 APLNQ9ULZ1 77 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 DNAJC13O75165 2243 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 COL6A3P12111 3177 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 EDC4Q6P2E9 1401 aaKnown RBP-0.4□□□□□ -2.47
COPS3-206ENST00000471414 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
COPS3-206ENST00000471414 LRRC37AA6NMS7 1700 aa-0.41□□□□□ -2.47
COPS3-206ENST00000471414 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.47
COPS3-206ENST00000471414 TENM2Q9NT68 2774 aa-0.41□□□□□ -2.47
COPS3-206ENST00000471414 A0A0G2JND7 137 aa-0.41□□□□□ -2.48
COPS3-206ENST00000471414 H3BQF6 201 aa-0.41□□□□□ -2.48
COPS3-206ENST00000471414 CACFD1Q9UGQ2 172 aa-0.41□□□□□ -2.48
COPS3-206ENST00000471414 SRRM2Q9UQ35 2752 aaKnown RBP-0.41□□□□□ -2.48
COPS3-206ENST00000471414 NKTRP30414 1462 aaKnown RBP-0.41□□□□□ -2.48
COPS3-206ENST00000471414 MLH3Q9UHC1 1453 aa-0.41□□□□□ -2.48
COPS3-206ENST00000471414 CHD8Q9HCK8 2581 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 PRDM15P57071 1507 aaPredicted RBP-0.42□□□□□ -2.48
COPS3-206ENST00000471414 TRBV25-1A0A075B6N4 114 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 GNGT2O14610 69 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 PMCHL1Q16048 86 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 PSMG4Q5JS54 123 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 CRIPTQ9P021 101 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 MON2Q7Z3U7 1717 aa-0.42□□□□□ -2.48
COPS3-206ENST00000471414 H0Y9P7 68 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 ASIPP42127 132 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 KRTAP19-7Q3SYF9 63 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 DEFB107AQ8IZN7 70 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 ACANP16112 2415 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 SETXQ7Z333 2677 aaKnown RBP-0.43□□□□□ -2.48
COPS3-206ENST00000471414 C5P01031 1676 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 SLIT1O75093 1534 aa-0.43□□□□□ -2.48
COPS3-206ENST00000471414 PEG3Q9GZU2 1588 aa-0.44□□□□□ -2.48
COPS3-206ENST00000471414 COL14A1Q05707 1796 aaKnown RBP-0.44□□□□□ -2.48
COPS3-206ENST00000471414 H7BZZ5 65 aa-0.44□□□□□ -2.48
COPS3-206ENST00000471414 I3L3M4 83 aa-0.44□□□□□ -2.48
COPS3-206ENST00000471414 S100PP25815 95 aa-0.44□□□□□ -2.48
COPS3-206ENST00000471414 TMEM218A2RU14 115 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 MPC2O95563 127 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 UQCRHP07919 91 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 GNGT1P63211 74 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 H1FX-AS1Q4G0G2 97 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 TRGV9Q99603 122 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 PMCHL2Q9BQD1 86 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 ABCC2Q92887 1545 aa-0.45□□□□□ -2.48
COPS3-206ENST00000471414 RAPGEF2Q9Y4G8 1499 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 CUX1P39880 1505 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 MT-ATP8P03928 68 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 C14orf144Q96I85 54 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 TCEAL7Q9BRU2 100 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 KIF20BQ96Q89 1820 aa-0.46□□□□□ -2.48
COPS3-206ENST00000471414 ANKRD36BQ8N2N9 1353 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms