RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 GNG2P59768 71 aa0.83□□□□□ -2.28
SMC5-202ENST00000471372 C6orf201Q7Z4U5 140 aa0.83□□□□□ -2.28
SMC5-202ENST00000471372 DEFB123Q8N688 67 aa0.83□□□□□ -2.28
SMC5-202ENST00000471372 ABCC2Q92887 1545 aa0.83□□□□□ -2.28
SMC5-202ENST00000471372 GOLGA4Q13439 2230 aaKnown RBP0.83□□□□□ -2.28
SMC5-202ENST00000471372 NHSL1Q5SYE7 1610 aa0.82□□□□□ -2.28
SMC5-202ENST00000471372 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
SMC5-202ENST00000471372 WFDC2Q14508 124 aa0.82□□□□□ -2.28
SMC5-202ENST00000471372 EPRSP07814 1512 aaKnown RBP0.82□□□□□ -2.28
SMC5-202ENST00000471372 FANCAO15360 1455 aa0.81□□□□□ -2.28
SMC5-202ENST00000471372 ATP10BO94823 1461 aa0.81□□□□□ -2.28
SMC5-202ENST00000471372 GNGT1P63211 74 aa0.81□□□□□ -2.28
SMC5-202ENST00000471372 DNAJC13O75165 2243 aa0.81□□□□□ -2.28
SMC5-202ENST00000471372 PAPPA2Q9BXP8 1791 aa0.8□□□□□ -2.28
SMC5-202ENST00000471372 ZNF292O60281 2723 aa0.8□□□□□ -2.28
SMC5-202ENST00000471372 EDC4Q6P2E9 1401 aaKnown RBP0.8□□□□□ -2.28
SMC5-202ENST00000471372 LEPROTL1O95214 131 aa0.79□□□□□ -2.28
SMC5-202ENST00000471372 HMGN3Q15651 99 aa0.79□□□□□ -2.28
SMC5-202ENST00000471372 TARBP1Q13395 1621 aaKnown RBP0.78□□□□□ -2.28
SMC5-202ENST00000471372 A0A0G2JMZ2 1700 aa0.78□□□□□ -2.28
SMC5-202ENST00000471372 C9orf62Q8N4C0 152 aa0.78□□□□□ -2.28
SMC5-202ENST00000471372 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
SMC5-202ENST00000471372 D6R8Y8 96 aa0.77□□□□□ -2.29
SMC5-202ENST00000471372 MUSTN1Q8IVN3 82 aa0.77□□□□□ -2.29
SMC5-202ENST00000471372 ZFYVE26Q68DK2 2539 aa0.76□□□□□ -2.29
SMC5-202ENST00000471372 NAV2Q8IVL1 2488 aa0.76□□□□□ -2.29
SMC5-202ENST00000471372 SHPRHQ149N8 1683 aa0.76□□□□□ -2.29
SMC5-202ENST00000471372 CEP162Q5TB80 1403 aa0.76□□□□□ -2.29
SMC5-202ENST00000471372 PYY3Q5JQD4 70 aa0.76□□□□□ -2.29
SMC5-202ENST00000471372 ANKRD17O75179 2603 aaKnown RBP0.76□□□□□ -2.29
SMC5-202ENST00000471372 SETBP1Q9Y6X0 1596 aa0.75□□□□□ -2.29
SMC5-202ENST00000471372 K7EP34 96 aa0.75□□□□□ -2.29
SMC5-202ENST00000471372 KIAA1551Q9HCM1 1747 aa0.75□□□□□ -2.29
SMC5-202ENST00000471372 IGF2RP11717 2491 aa0.74□□□□□ -2.29
SMC5-202ENST00000471372 K7EQZ3 153 aa0.74□□□□□ -2.29
SMC5-202ENST00000471372 Q5VSD8 79 aa0.74□□□□□ -2.29
SMC5-202ENST00000471372 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
SMC5-202ENST00000471372 PPRC1Q5VV67 1664 aaKnown RBP0.73□□□□□ -2.29
SMC5-202ENST00000471372 PVALEFA0A1B0GWK0 134 aa0.73□□□□□ -2.29
SMC5-202ENST00000471372 COX6B1P14854 86 aa0.73□□□□□ -2.29
SMC5-202ENST00000471372 SPRR1AP35321 89 aa0.73□□□□□ -2.29
SMC5-202ENST00000471372 PEA15Q15121 130 aa0.72□□□□□ -2.29
SMC5-202ENST00000471372 ALKAL2Q6UX46 152 aa0.72□□□□□ -2.29
SMC5-202ENST00000471372 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
SMC5-202ENST00000471372 RGPD4Q7Z3J3 1758 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 SMIM11AP58511 58 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 DEFB109BQ30KR1 87 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 U3KQA8 63 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 IQSEC2Q5JU85 1478 aa0.71□□□□□ -2.3
SMC5-202ENST00000471372 SLIT1O75093 1534 aa0.7□□□□□ -2.3
SMC5-202ENST00000471372 PTPRZ1P23471 2315 aaPredicted RBP0.7□□□□□ -2.3
SMC5-202ENST00000471372 C5P01031 1676 aa0.7□□□□□ -2.3
SMC5-202ENST00000471372 HMGN2P05204 90 aaKnown RBP0.7□□□□□ -2.3
SMC5-202ENST00000471372 S100A16Q96FQ6 103 aaKnown RBP0.7□□□□□ -2.3
SMC5-202ENST00000471372 MYO3AQ8NEV4 1616 aa0.7□□□□□ -2.3
SMC5-202ENST00000471372 MYH4Q9Y623 1939 aa0.7□□□□□ -2.3
SMC5-202ENST00000471372 ABCC3O15438 1527 aa0.69□□□□□ -2.3
SMC5-202ENST00000471372 KIAA0556O60303 1618 aa0.69□□□□□ -2.3
SMC5-202ENST00000471372 SPRR1BP22528 89 aa0.69□□□□□ -2.3
SMC5-202ENST00000471372 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
SMC5-202ENST00000471372 CUX1P39880 1505 aa0.69□□□□□ -2.3
SMC5-202ENST00000471372 CYB5AP00167 134 aa0.68□□□□□ -2.3
SMC5-202ENST00000471372 UBR1Q8IWV7 1749 aa0.68□□□□□ -2.3
SMC5-202ENST00000471372 PIEZO2Q9H5I5 2752 aa0.68□□□□□ -2.3
SMC5-202ENST00000471372 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
SMC5-202ENST00000471372 DOPEY2Q9Y3R5 2298 aa0.67□□□□□ -2.3
SMC5-202ENST00000471372 UBE2D4Q9Y2X8 147 aa0.67□□□□□ -2.3
SMC5-202ENST00000471372 PLIN4Q96Q06 1357 aa0.67□□□□□ -2.3
SMC5-202ENST00000471372 SAMD9Q5K651 1589 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 RGPD3A6NKT7 1758 aaPredicted RBP0.66□□□□□ -2.3
SMC5-202ENST00000471372 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 NEXMIFQ5QGS0 1516 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 IGLC2P0DOY2 106 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 IGLC3P0DOY3 106 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 CRIPTQ9P021 101 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 PTPRQQ9UMZ3 2332 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 CRYBG1Q9Y4K1 1723 aa0.66□□□□□ -2.3
SMC5-202ENST00000471372 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
SMC5-202ENST00000471372 USMG5Q96IX5 58 aa0.65□□□□□ -2.31
SMC5-202ENST00000471372 ANKRD36A6QL64 1941 aa0.64□□□□□ -2.31
SMC5-202ENST00000471372 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
SMC5-202ENST00000471372 NMSQ5H8A3 153 aa0.63□□□□□ -2.31
SMC5-202ENST00000471372 TSC2P49815 1807 aa0.63□□□□□ -2.31
SMC5-202ENST00000471372 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
SMC5-202ENST00000471372 RB1CC1Q8TDY2 1594 aa0.62□□□□□ -2.31
SMC5-202ENST00000471372 TDRG1Q3Y452 100 aa0.62□□□□□ -2.31
SMC5-202ENST00000471372 GPR98Q8WXG9 6306 aa0.62□□□□□ -2.31
SMC5-202ENST00000471372 URB1O60287 2271 aaKnown RBP0.61□□□□□ -2.31
SMC5-202ENST00000471372 IQCF6A8MYZ5 107 aa0.61□□□□□ -2.31
SMC5-202ENST00000471372 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
SMC5-202ENST00000471372 FMN2Q9NZ56 1722 aa0.6□□□□□ -2.31
SMC5-202ENST00000471372 SPTBN1Q01082 2364 aaKnown RBP0.59□□□□□ -2.31
SMC5-202ENST00000471372 COX8AP10176 69 aa0.59□□□□□ -2.31
SMC5-202ENST00000471372 CCDC141Q6ZP82 1450 aa0.58□□□□□ -2.32
SMC5-202ENST00000471372 SNRPFP62306 86 aaKnown RBP0.57□□□□□ -2.32
SMC5-202ENST00000471372 FXYD6Q9H0Q3 95 aa0.57□□□□□ -2.32
SMC5-202ENST00000471372 LRRC37AA6NMS7 1700 aa0.57□□□□□ -2.32
SMC5-202ENST00000471372 PLGLAQ15195 96 aa0.56□□□□□ -2.32
SMC5-202ENST00000471372 DEFB112Q30KQ8 113 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms