RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 UQCR10Q9UDW1 63 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 FHAD1B1AJZ9 1412 aa-1.93□□□□□ -2.72
COMMD3-209ENST00000471350 DSPP15924 2871 aaKnown RBP-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 GCN1Q92616 2671 aaKnown RBP-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 SCGB1A1P11684 91 aa-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 MT1HP80294 61 aa-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 PDE4DIPQ5VU43 2346 aa-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 A0A0G2JMZ2 1700 aa-1.94□□□□□ -2.72
COMMD3-209ENST00000471350 TRAV30A0A087WSZ9 112 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 CHKB-CPT1BH3BT56 60 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 CCL22O00626 93 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 CKS1BP61024 79 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 HEPN1Q6WQI6 88 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 FAM223AQ8IWN6 122 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 DPH3Q96FX2 82 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 SELENOSQ9BQE4 189 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 ARL2-SNX15V9GYD0 113 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 C1orf167Q5SNV9 1468 aa-1.95□□□□□ -2.72
COMMD3-209ENST00000471350 PATJQ8NI35 1801 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 DOCK2Q92608 1830 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 LOC100130705A0A1B0GUX0 176 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 C9orf92A6NGG3 77 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 TSTD1Q8NFU3 115 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 PPP3R2Q96LZ3 170 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 CDC42SE2Q9NRR3 84 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 ZFHX3Q15911 3703 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 CMYA5Q8N3K9 4069 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 BTAF1O14981 1849 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 FAM186AA6NE01 2351 aa-1.96□□□□□ -2.72
COMMD3-209ENST00000471350 MYOZ3Q8TDC0 251 aa-1.97□□□□□ -2.72
COMMD3-209ENST00000471350 COPZ2Q9P299 210 aa-1.97□□□□□ -2.72
COMMD3-209ENST00000471350 CDKN2A-AS1Q9UH64 79 aa-1.97□□□□□ -2.72
COMMD3-209ENST00000471350 CFTRP13569 1480 aa-1.97□□□□□ -2.72
COMMD3-209ENST00000471350 MYOM1P52179 1685 aa-1.97□□□□□ -2.73
COMMD3-209ENST00000471350 DYNC1H1Q14204 4646 aaKnown RBP-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 A0A1B0GWA3 101 aa-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 RPS25P62851 125 aaKnown RBP-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 C9orf153Q5TBE3 101 aa-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 LCN9Q8WX39 176 aa-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 ARL11Q969Q4 196 aa-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 SERP1Q9Y6X1 66 aa-1.98□□□□□ -2.73
COMMD3-209ENST00000471350 ANKRD50Q9ULJ7 1429 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 LELP1Q5T871 98 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 LZICQ8WZA0 190 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 SPANXDQ9BXN6 97 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 RERGLQ9H628 205 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 A0A0C4DFX4 3053 aa-1.99□□□□□ -2.73
COMMD3-209ENST00000471350 SMG6Q86US8 1419 aaKnown RBP-2□□□□□ -2.73
COMMD3-209ENST00000471350 A0A1B0GU69 56 aa-2□□□□□ -2.73
COMMD3-209ENST00000471350 SNCAP37840 140 aa-2□□□□□ -2.73
COMMD3-209ENST00000471350 WFDC13Q8IUB5 93 aa-2□□□□□ -2.73
COMMD3-209ENST00000471350 LSM10Q969L4 123 aaKnown RBP-2□□□□□ -2.73
COMMD3-209ENST00000471350 MRPL34Q9BQ48 92 aaKnown RBP-2□□□□□ -2.73
COMMD3-209ENST00000471350 SNRNP25Q9BV90 132 aaKnown RBP-2□□□□□ -2.73
COMMD3-209ENST00000471350 ABCA13Q86UQ4 5058 aa-2□□□□□ -2.73
COMMD3-209ENST00000471350 COL12A1Q99715 3063 aa-2□□□□□ -2.73
COMMD3-209ENST00000471350 CPSF1Q10570 1443 aaKnown RBP-2□□□□□ -2.73
COMMD3-209ENST00000471350 SPEF2Q9C093 1822 aa-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 DNAH8Q96JB1 4490 aa-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 COMMD6Q7Z4G1 85 aa-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 XRN1Q8IZH2 1706 aaKnown RBP-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 NBEAL2Q6ZNJ1 2754 aa-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 CELSR3Q9NYQ7 3312 aa-2.01□□□□□ -2.73
COMMD3-209ENST00000471350 CICQ96RK0 1608 aaPredicted RBP-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 TET3O43151 1660 aa-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 CEP290O15078 2479 aa-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 PFDN5Q99471 154 aa-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 HIGD1BQ9P298 99 aa-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 PLEKHH2Q8IVE3 1493 aa-2.02□□□□□ -2.73
COMMD3-209ENST00000471350 C8orf59Q8N0T1 100 aaPredicted RBP-2.03□□□□□ -2.73
COMMD3-209ENST00000471350 QRICH2Q9H0J4 1663 aa-2.03□□□□□ -2.73
COMMD3-209ENST00000471350 PSME4Q14997 1843 aa-2.03□□□□□ -2.73
COMMD3-209ENST00000471350 DNAH7Q8WXX0 4024 aa-2.03□□□□□ -2.73
COMMD3-209ENST00000471350 SAA2P0DJI9 122 aaPredicted RBP-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 GRIN2AQ12879 1464 aa-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 Q56UQ5 140 aa-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 EDC4Q6P2E9 1401 aaKnown RBP-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 EHBP1L1Q8N3D4 1523 aa-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 NLRP1Q9C000 1473 aa-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 LINC00846Q9NV44 126 aa-2.04□□□□□ -2.74
COMMD3-209ENST00000471350 ARHGEF5Q12774 1597 aa-2.05□□□□□ -2.74
COMMD3-209ENST00000471350 C5orf38Q86SI9 138 aa-2.05□□□□□ -2.74
COMMD3-209ENST00000471350 MARF1Q9Y4F3 1742 aaKnown RBP-2.05□□□□□ -2.74
COMMD3-209ENST00000471350 CLIP1P30622 1438 aa-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 MIF4GDA9UHW6 222 aaKnown RBP-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 COX6CP09669 75 aa-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 TRAPPC2P0DI81 140 aa-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 TRAPPC2BP0DI82 140 aa-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 C6orf201Q7Z4U5 140 aa-2.06□□□□□ -2.74
COMMD3-209ENST00000471350 ACACBO00763 2458 aa-2.07□□□□□ -2.74
COMMD3-209ENST00000471350 ADGRL2O95490 1459 aa-2.07□□□□□ -2.74
COMMD3-209ENST00000471350 FAM223BA6NKX1 122 aa-2.07□□□□□ -2.74
COMMD3-209ENST00000471350 ARPC4P59998 168 aa-2.07□□□□□ -2.74
COMMD3-209ENST00000471350 PYDC1Q8WXC3 89 aa-2.07□□□□□ -2.74
COMMD3-209ENST00000471350 NCOA3Q9Y6Q9 1424 aa-2.08□□□□□ -2.74
COMMD3-209ENST00000471350 H0YAA0 97 aa-2.08□□□□□ -2.74
COMMD3-209ENST00000471350 LINC00474Q9P2X8 69 aa-2.08□□□□□ -2.74
COMMD3-209ENST00000471350 COL14A1Q05707 1796 aaKnown RBP-2.08□□□□□ -2.74
COMMD3-209ENST00000471350 SPTY2D1-AS1A0A0U1RR47 76 aa-2.09□□□□□ -2.74
COMMD3-209ENST00000471350 F6UZH7 168 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms