RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 A6NDN8 102 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 NUPR2A6NF83 97 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 NDUFA1O15239 70 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 TIMM17BO60830 172 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 APOMO95445 188 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3-30P01768 117 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3-33P01772 117 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 DNAH10OSP0CZ25 163 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 IGHV3-30-5P0DP03 117 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 XCL1P47992 114 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 HERV-K104P63124 156 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 CIRBPQ14011 172 aaKnown RBP4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 BATFQ16520 125 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 MIAQ16674 131 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 Q6ZVH6 145 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 WFDC10BQ8IUB3 73 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 CEND1Q8N111 149 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 COX7B2Q8TF08 81 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 ORAOV1Q8WV07 137 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 CHCHD10Q8WYQ3 142 aaPredicted RBP4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 UPK3BQ9BT76 320 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 TP73-AS1Q9UF72 201 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 KLK5Q9Y337 293 aaPredicted RBP4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 LINC00588Q9Y4M8 146 aa4.11□□□□□ -1.75
SMNDC1-204ENST00000471297 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 TMEM238C9JI98 176 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 K7EP13 123 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 COX7A2LO14548 114 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 PRSS2P07478 247 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 CLPSL2Q6UWE3 100 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 C5orf38Q86SI9 138 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 C10orf126Q8N4M7 172 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
SMNDC1-204ENST00000471297 IFITM1P13164 125 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 CXCL5P42830 114 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 Q8IZM0 81 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 COPS9Q8WXC6 57 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 UBE2WQ96B02 151 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 ZNF625Q96I27 306 aaPredicted RBP4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 SPANXDQ9BXN6 97 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 Q9H8V8 135 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
SMNDC1-204ENST00000471297 IGLV10-54A0A075B6I4 117 aa4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 IBA57-AS1B1ANH7 110 aa4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 RMI2Q96E14 147 aa4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
SMNDC1-204ENST00000471297 GAGE10A6NGK3 116 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 F8WDY8 70 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 FXYD2P54710 66 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 MEIG1Q5JSS6 88 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 CFAP161Q6P656 301 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 MUSTN1Q8IVN3 82 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 UBE2DNLQ8IWF7 75 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 LITAFQ99732 161 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 NBEAL2Q6ZNJ1 2754 aa4.07□□□□□ -1.76
SMNDC1-204ENST00000471297 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 CKS1BP61024 79 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 KIAA0087Q14695 138 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 KRTAP26-1Q6PEX3 210 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 MUC7Q8TAX7 377 aa4.06□□□□□ -1.76
SMNDC1-204ENST00000471297 IGKV2D-24A0A075B6R9 120 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 SPAG11BQ08648 103 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 COX17Q14061 63 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 ADAMTSL4-AS1Q5T5F5 129 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 NHP2Q9NX24 153 aaKnown RBP4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 MGAM2Q2M2H8 2515 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 PKD1L1Q8TDX9 2849 aa4.05□□□□□ -1.76
SMNDC1-204ENST00000471297 ANK2Q01484 3957 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 DNAH3Q8TD57 4116 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 A0A0B4J2C4 111 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 A0A1B0GV90 55 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 A4D1N5 150 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 LINC00158P58513 81 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 ERG28Q9UKR5 140 aa4.04□□□□□ -1.76
SMNDC1-204ENST00000471297 NOTCH1P46531 2555 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 CFC1BP0CG36 223 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 CFC1P0CG37 223 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 TTC32Q5I0X7 151 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 RAB37Q96AX2 223 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 C2orf48Q96LS8 159 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 Q9HAA7 133 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 CMYA5Q8N3K9 4069 aa4.03□□□□□ -1.76
SMNDC1-204ENST00000471297 LOC107984156A0A0G2JMH3 177 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 A0A0U1RRA0 63 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 PFN2P35080 140 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 C2orf82Q6UX34 121 aa4.02□□□□□ -1.77
SMNDC1-204ENST00000471297 UNQ6190/PRO20217Q6UXQ8 127 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms