RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 NUP188Q5SRE5 1749 aa2.19□□□□□ -2.06
PRPF40A-206ENST00000471167 COL4A1P02462 1669 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 A0A1B0GUL6 1792 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 TOP2AP11388 1531 aaKnown RBP2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 LAMC1P11047 1609 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 COX17Q14061 63 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 SMIM4Q8WVI0 70 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 PLAC8Q9NZF1 115 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 ZNF236Q9UL36 1845 aa2.18□□□□□ -2.06
PRPF40A-206ENST00000471167 PAPPAQ13219 1627 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 PKD1L3Q7Z443 1732 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 H0Y9P7 68 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 CAV3P56539 151 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 GDF5OSQ5U4N7 250 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 FXYD6Q9H0Q3 95 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 CFAP43Q8NDM7 1665 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 FN1P02751 2386 aaKnown RBP2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 USP32Q8NFA0 1604 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 PHRF1Q9P1Y6 1649 aaKnown RBP2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 ALKQ9UM73 1620 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 CLASP1Q7Z460 1538 aa2.17□□□□□ -2.06
PRPF40A-206ENST00000471167 ALS2Q96Q42 1657 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 DIP2AQ14689 1571 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 A0A0D9SFI3 127 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 ACYP2P14621 99 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 Q6ZQY7 126 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 LRP6O75581 1613 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 SYCP2Q9BX26 1530 aa2.16□□□□□ -2.06
PRPF40A-206ENST00000471167 WIZO95785 1651 aa2.15□□□□□ -2.06
PRPF40A-206ENST00000471167 IFT172Q9UG01 1749 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 HCRTO43612 131 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 IFI6P09912 130 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 SPINK7P58062 85 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 CCL19Q99731 98 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 UBR3Q6ZT12 1888 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 ZMYM4Q5VZL5 1548 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 MROH2AA6NES4 1674 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 C5P01031 1676 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 NHSQ6T4R5 1651 aa2.15□□□□□ -2.07
PRPF40A-206ENST00000471167 TIAM2Q8IVF5 1701 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 DNAJC13O75165 2243 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 NESP48681 1621 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 SNRPGP15A8MWD9 76 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 SPATA8Q6RVD6 105 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 TMEM263Q8WUH6 116 aaKnown RBP2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 LINC00472Q9H8W2 130 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 SDK1Q7Z5N4 2213 aa2.14□□□□□ -2.07
PRPF40A-206ENST00000471167 CICQ96RK0 1608 aaPredicted RBP2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 MYO7AQ13402 2215 aa2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 NDUFB1O75438 58 aa2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 HMGA1P17096 107 aaKnown RBP2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 C10orf113Q5VZT2 155 aa2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 MAST1Q9Y2H9 1570 aa2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 NHSL1Q5SYE7 1610 aa2.13□□□□□ -2.07
PRPF40A-206ENST00000471167 PARP4Q9UKK3 1724 aaKnown RBP2.12□□□□□ -2.07
PRPF40A-206ENST00000471167 OBSCN-AS1Q96MR7 158 aa2.12□□□□□ -2.07
PRPF40A-206ENST00000471167 TSC2P49815 1807 aa2.12□□□□□ -2.07
PRPF40A-206ENST00000471167 ZNF831Q5JPB2 1677 aa2.12□□□□□ -2.07
PRPF40A-206ENST00000471167 ANKRD50Q9ULJ7 1429 aa2.11□□□□□ -2.07
PRPF40A-206ENST00000471167 TRAV21A0A0B4J279 112 aa2.11□□□□□ -2.07
PRPF40A-206ENST00000471167 LINC01549A6NIU2 74 aa2.11□□□□□ -2.07
PRPF40A-206ENST00000471167 J3QRE1 110 aa2.11□□□□□ -2.07
PRPF40A-206ENST00000471167 NREPQ16612 68 aa2.11□□□□□ -2.07
PRPF40A-206ENST00000471167 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
PRPF40A-206ENST00000471167 COL14A1Q05707 1796 aaKnown RBP2.1□□□□□ -2.07
PRPF40A-206ENST00000471167 WFDC9Q8NEX5 89 aa2.1□□□□□ -2.07
PRPF40A-206ENST00000471167 UGGT1Q9NYU2 1555 aa2.1□□□□□ -2.07
PRPF40A-206ENST00000471167 BCORQ6W2J9 1755 aa2.09□□□□□ -2.07
PRPF40A-206ENST00000471167 CPS1P31327 1500 aa2.09□□□□□ -2.07
PRPF40A-206ENST00000471167 LRRC7Q96NW7 1537 aa2.09□□□□□ -2.07
PRPF40A-206ENST00000471167 ZCCHC13Q8WW36 166 aaKnown RBP2.09□□□□□ -2.07
PRPF40A-206ENST00000471167 SAMD9Q5K651 1589 aa2.09□□□□□ -2.08
PRPF40A-206ENST00000471167 RICTORQ6R327 1708 aa2.08□□□□□ -2.08
PRPF40A-206ENST00000471167 DEFB112Q30KQ8 113 aa2.08□□□□□ -2.08
PRPF40A-206ENST00000471167 EIF2AK4Q9P2K8 1649 aaKnown RBP2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 NCOA6Q14686 2063 aaPredicted RBP2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 C10orf99Q6UWK7 81 aa2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 GAFA1Q96PS6 74 aa2.07□□□□□ -2.08
PRPF40A-206ENST00000471167 MED13LQ71F56 2210 aa2.06□□□□□ -2.08
PRPF40A-206ENST00000471167 CROCC2H7BZ55 1655 aa2.06□□□□□ -2.08
PRPF40A-206ENST00000471167 PAPPA2Q9BXP8 1791 aa2.06□□□□□ -2.08
PRPF40A-206ENST00000471167 TRBV30A0A0K0K1B3 111 aa2.06□□□□□ -2.08
PRPF40A-206ENST00000471167 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 A0A1B0GU69 56 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 Q6ZRX8 168 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 SMIM11BQ8TCY0 68 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 ABCC6O95255 1503 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 ICE1Q9Y2F5 2266 aa2.05□□□□□ -2.08
PRPF40A-206ENST00000471167 LCE6AA0A183 80 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 KIAA0556O60303 1618 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 HAMPP81172 84 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 UNQ6190/PRO20217Q6UXQ8 127 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 INTS1Q8N201 2190 aaKnown RBP2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 FMN2Q9NZ56 1722 aa2.04□□□□□ -2.08
PRPF40A-206ENST00000471167 E9PCH4 1651 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 BIVM-ERCC5R4GMW8 1640 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms