RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 TRBV27A0A0K0K1C4 114 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 A0A1B0GW15 77 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 TMEM262E9PQX1 116 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 I3L3M4 83 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 LECT2O14960 151 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 FGF6P10767 208 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 ESDP10768 282 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 TCTAP57738 103 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 RBX1P62877 108 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 Q8N8P6 123 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 PMCHL2Q9BQD1 86 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 MRPS16Q9Y3D3 137 aaKnown RBP2.38□□□□□ -2.03
COL9A1-206ENST00000470652 HSPG2P98160 4391 aa2.38□□□□□ -2.03
COL9A1-206ENST00000470652 FAT1Q14517 4588 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 HECTD4Q9Y4D8 3996 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 IGLV4-69A0A075B6H9 119 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.37□□□□□ -2.03
COL9A1-206ENST00000470652 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 LCE6AA0A183 80 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 H0Y8G0 127 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 H3BNG1 76 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 C3orf84H3BNL1 204 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 H7C1H1 209 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 MT-ND6P03923 174 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 S100A8P05109 93 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 FABP4P15090 132 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 FCER1GP30273 86 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 HNRNPA3P51991 378 aaKnown RBP2.37□□□□□ -2.03
COL9A1-206ENST00000470652 COX6A2Q02221 97 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 COTL1Q14019 142 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 LELP1Q5T871 98 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 ENHOQ6UWT2 76 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 FA2HQ7L5A8 372 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 BAGE3Q86Y29 109 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 LINC00269Q8N2A0 174 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 C15orf53Q8NAA6 179 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 UBE2WQ96B02 151 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 LINC00526Q96FQ7 95 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 C20orf78Q9BR46 151 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 TMEM243Q9BU79 118 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 UBE2D4Q9Y2X8 147 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
COL9A1-206ENST00000470652 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 LINC01546A6NGU7 62 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 SIVA1O15304 175 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 PPBPP02775 128 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 ANGP03950 147 aaKnown RBP2.36□□□□□ -2.03
COL9A1-206ENST00000470652 LINC00614P0C842 121 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 CCL18P55774 89 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 Q0VG73 95 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 LGALS9CQ6DKI2 356 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 KRTAP26-1Q6PEX3 210 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 ERASQ7Z444 233 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 TP73-AS1Q9UF72 201 aa2.36□□□□□ -2.03
COL9A1-206ENST00000470652 IGHV3-64A0A075B6Q5 118 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 A0A087WX48 190 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 TRAV8-6A0A0B4J262 113 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 A0A0J9YXV3 536 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 UBE2L6O14933 153 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 HSBP1O75506 76 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 HBDP02042 147 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 XCL1P47992 114 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 RAB5BP61020 215 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 HAMPP81172 84 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 MAJINQ3KP22 176 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 LINC01556Q5JQF7 62 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 AMMECR1LQ6DCA0 310 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
COL9A1-206ENST00000470652 C5orf38Q86SI9 138 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 HIST3H2BBQ8N257 126 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 OR5A1Q8NGJ0 315 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 BAALCQ8WXS3 180 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H4GQ99525 98 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
COL9A1-206ENST00000470652 CDC42SE2Q9NRR3 84 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 RYR1P21817 5038 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 BIRC6Q9NR09 4857 aa2.35□□□□□ -2.03
COL9A1-206ENST00000470652 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 KRTAP4-16G5E9R7 235 aaPredicted RBP2.34□□□□□ -2.03
COL9A1-206ENST00000470652 CCL25O15444 150 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 REG3AQ06141 175 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 COX19Q49B96 90 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 ATOH7Q8N100 152 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 C6orf223Q8N319 242 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 ZNF664Q8N3J9 261 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 CHCHD10Q8WYQ3 142 aaPredicted RBP2.34□□□□□ -2.03
COL9A1-206ENST00000470652 HIST1H2BLQ99880 126 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 LAMTOR2Q9Y2Q5 125 aa2.34□□□□□ -2.03
COL9A1-206ENST00000470652 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms