RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 Q8IZM0 81 aa5.52□□□□□ -1.53
GTF3A-206ENST00000470606 CEND1Q8N111 149 aa5.52□□□□□ -1.53
GTF3A-206ENST00000470606 HIST1H4GQ99525 98 aa5.52□□□□□ -1.53
GTF3A-206ENST00000470606 SPANXB1Q9NS25 103 aaPredicted RBP5.52□□□□□ -1.53
GTF3A-206ENST00000470606 MALP21145 153 aa5.51□□□□□ -1.53
GTF3A-206ENST00000470606 C1orf43Q9BWL3 253 aa5.51□□□□□ -1.53
GTF3A-206ENST00000470606 SMIM13P0DJ93 91 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 TAL2Q16559 108 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 C9orf116Q5BN46 136 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-206ENST00000470606 C6orf226Q5I0X4 101 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 CFAP161Q6P656 301 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 K7ERJ3 54 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 SRSF9Q13242 221 aaKnown RBP eCLIP5.5□□□□□ -1.53
GTF3A-206ENST00000470606 HIGD2BQ4VC39 106 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 UNQ6190/PRO20217Q6UXQ8 127 aa5.5□□□□□ -1.53
GTF3A-206ENST00000470606 NPC2P61916 151 aa5.49□□□□□ -1.53
GTF3A-206ENST00000470606 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
GTF3A-206ENST00000470606 WFDC2Q14508 124 aa5.49□□□□□ -1.53
GTF3A-206ENST00000470606 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
GTF3A-206ENST00000470606 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
GTF3A-206ENST00000470606 TIMM17BO60830 172 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 HERV-K104P63124 156 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 XP32Q5T750 250 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
GTF3A-206ENST00000470606 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 DNAH6Q9C0G6 4158 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 NBDYA0A0U1RRE5 68 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 TAX1BP3O14907 124 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 SLPIP03973 132 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 PRSS2P07478 247 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 HYDINQ4G0P3 5121 aa5.48□□□□□ -1.53
GTF3A-206ENST00000470606 HECTD4Q9Y4D8 3996 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 A4D1N5 150 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 LECT2O14960 151 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 APOMO95445 188 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 PFN2P35080 140 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 MEIG1Q5JSS6 88 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
GTF3A-206ENST00000470606 NHP2Q9NX24 153 aaKnown RBP5.47□□□□□ -1.53
GTF3A-206ENST00000470606 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 ERG28Q9UKR5 140 aa5.47□□□□□ -1.53
GTF3A-206ENST00000470606 GVQW2A0A096LPI5 108 aaPredicted RBP5.46□□□□□ -1.53
GTF3A-206ENST00000470606 A0A1B0GV90 55 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 A0A1B0GWB2 263 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 USP17L23D6RBM5 183 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 CFC1BP0CG36 223 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 CFC1P0CG37 223 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 CKS1BP61024 79 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 LBHQ53QV2 105 aaPredicted RBP5.46□□□□□ -1.53
GTF3A-206ENST00000470606 MIR7-3HGQ8N6C7 128 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 LINC00308Q8TCZ7 52 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.53
GTF3A-206ENST00000470606 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
GTF3A-206ENST00000470606 M0R2N4 97 aa5.46□□□□□ -1.54
GTF3A-206ENST00000470606 PTTG1IPP53801 180 aa5.46□□□□□ -1.54
GTF3A-206ENST00000470606 Q6ZRU5 148 aa5.46□□□□□ -1.54
GTF3A-206ENST00000470606 NAA38Q9BRA0 125 aaKnown RBP5.46□□□□□ -1.54
GTF3A-206ENST00000470606 LINC00158P58513 81 aa5.45□□□□□ -1.54
GTF3A-206ENST00000470606 Q8NDZ9 215 aa5.45□□□□□ -1.54
GTF3A-206ENST00000470606 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
GTF3A-206ENST00000470606 CXCL5P42830 114 aa5.44□□□□□ -1.54
GTF3A-206ENST00000470606 CIRBPQ14011 172 aaKnown RBP5.44□□□□□ -1.54
GTF3A-206ENST00000470606 Q6ZR54 194 aa5.44□□□□□ -1.54
GTF3A-206ENST00000470606 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
GTF3A-206ENST00000470606 LRCOL1A6NCL2 159 aa5.43□□□□□ -1.54
GTF3A-206ENST00000470606 A6NDN8 102 aa5.43□□□□□ -1.54
GTF3A-206ENST00000470606 IFITM1P13164 125 aa5.43□□□□□ -1.54
GTF3A-206ENST00000470606 SFTA2Q6UW10 78 aa5.43□□□□□ -1.54
GTF3A-206ENST00000470606 CAMK2N2Q96S95 79 aa5.43□□□□□ -1.54
GTF3A-206ENST00000470606 IGKV2-28A0A075B6P5 120 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 IGKV2D-28P01615 120 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
GTF3A-206ENST00000470606 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 RMI2Q96E14 147 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 C2orf48Q96LS8 159 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 COX11Q9Y6N1 276 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 LY6G6CO95867 125 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 TTC32Q5I0X7 151 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
GTF3A-206ENST00000470606 LOC107984156A0A0G2JMH3 177 aa5.41□□□□□ -1.54
GTF3A-206ENST00000470606 PRR3P79522 188 aaKnown RBP5.41□□□□□ -1.54
GTF3A-206ENST00000470606 SYCNQ0VAF6 134 aa5.41□□□□□ -1.54
GTF3A-206ENST00000470606 COX17Q14061 63 aa5.41□□□□□ -1.54
GTF3A-206ENST00000470606 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
GTF3A-206ENST00000470606 A0A0B4J2C4 111 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 TRBV30A0A0K0K1B3 111 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 C9orf118A6NHY6 69 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 C3orf84H3BNL1 204 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 TSPAN13O95857 204 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 Q6ZRP5 223 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
GTF3A-206ENST00000470606 H3BUT2 72 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms