RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 HIST1H2BNQ99877 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 HIST1H2BMQ99879 126 aa5.64□□□□□ -1.51
SHROOM3-203ENST00000469923 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 TEX43Q6ZNM6 134 aa5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 LINC00469Q8N7U9 141 aa5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 URB1-AS1Q96HZ7 61 aa5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 VCX2Q9H322 139 aa5.63□□□□□ -1.51
SHROOM3-203ENST00000469923 A0A087WZ39 114 aa5.62□□□□□ -1.51
SHROOM3-203ENST00000469923 NDUFA6P56556 154 aa5.62□□□□□ -1.51
SHROOM3-203ENST00000469923 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
SHROOM3-203ENST00000469923 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
SHROOM3-203ENST00000469923 LINC01546A6NGU7 62 aa5.61□□□□□ -1.51
SHROOM3-203ENST00000469923 K7EMI3 77 aa5.61□□□□□ -1.51
SHROOM3-203ENST00000469923 S100A6P06703 90 aa5.61□□□□□ -1.51
SHROOM3-203ENST00000469923 SCGB3A1Q96QR1 104 aa5.61□□□□□ -1.51
SHROOM3-203ENST00000469923 SNRPEP62304 92 aaKnown RBP5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 RNF151Q2KHN1 245 aa5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 Q6ZN92 141 aa5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 C18orf32Q8TCD1 76 aa5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 MRPL35Q9NZE8 188 aaKnown RBP5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 CDKN2A-AS1Q9UH64 79 aa5.6□□□□□ -1.51
SHROOM3-203ENST00000469923 A0A096LNJ9 63 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 PMCHL1Q16048 86 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 SPINK6Q6UWN8 80 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 FA2HQ7L5A8 372 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 ERASQ7Z444 233 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 BAGE3Q86Y29 109 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 PRR26Q8N8Z3 221 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 OR10D4PQ8NGN7 298 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 C2orf88Q9BSF0 95 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 TOMM7Q9P0U1 55 aa5.59□□□□□ -1.51
SHROOM3-203ENST00000469923 C5orf52A6NGY3 159 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 NDUFA1O15239 70 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 SERF1AO75920 110 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 LINC00614P0C842 121 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 G0S2P27469 103 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 XAGE1AQ9HD64 81 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 LINC00474Q9P2X8 69 aa5.58□□□□□ -1.52
SHROOM3-203ENST00000469923 MUC2Q02817 5179 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 NPSP0C0P6 89 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 LINC00310P59036 64 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 PDZD11Q5EBL8 140 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 HIST3H2BBQ8N257 126 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 CST9LQ9H4G1 147 aa5.57□□□□□ -1.52
SHROOM3-203ENST00000469923 LOC105371267A0A1B0GV96 52 aa5.56□□□□□ -1.52
SHROOM3-203ENST00000469923 NUPR1O60356 82 aa5.56□□□□□ -1.52
SHROOM3-203ENST00000469923 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
SHROOM3-203ENST00000469923 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
SHROOM3-203ENST00000469923 LINC01561Q8N1V8 128 aa5.56□□□□□ -1.52
SHROOM3-203ENST00000469923 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 HERVK_113P63121 156 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 PMVKQ15126 192 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 PAPPA-AS1Q5QFB9 102 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 GEMIN7Q9H840 131 aaKnown RBP5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
SHROOM3-203ENST00000469923 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 SMIM1B2RUZ4 78 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 S100A2P29034 98 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 C6orf226Q5I0X4 101 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 Q8NDZ9 215 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 CHCHD1Q96BP2 118 aaKnown RBP5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
SHROOM3-203ENST00000469923 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 F8WDY8 70 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 M0QXV9 152 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 HSBP1O75506 76 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 PRSS2P07478 247 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 FABP4P15090 132 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 SEC11AP67812 179 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 FAM19A2Q8N3H0 131 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 PACRGQ96M98 296 aaPredicted RBP5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 HIST1H2BLQ99880 126 aa5.53□□□□□ -1.52
SHROOM3-203ENST00000469923 GAGE10A6NGK3 116 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 LINC01549A6NIU2 74 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 RPL37AP8A6NKH3 93 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 HBDP02042 147 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 Q8IZM0 81 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
SHROOM3-203ENST00000469923 IGLV5-45A0A087WSX0 123 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 TRBV30A0A0K0K1B3 111 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 AKR1D1P51857 326 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 CKS1BP61024 79 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 REG3GQ6UW15 175 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
SHROOM3-203ENST00000469923 H0Y9J4 135 aa5.5□□□□□ -1.53
SHROOM3-203ENST00000469923 IGLC3P0DOY3 106 aa5.5□□□□□ -1.53
SHROOM3-203ENST00000469923 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
SHROOM3-203ENST00000469923 UBE2BP63146 152 aa5.5□□□□□ -1.53
SHROOM3-203ENST00000469923 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
SHROOM3-203ENST00000469923 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
SHROOM3-203ENST00000469923 C11orf86A6NJI1 115 aa5.49□□□□□ -1.53
SHROOM3-203ENST00000469923 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
SHROOM3-203ENST00000469923 F8VRH5 84 aa5.48□□□□□ -1.53
SHROOM3-203ENST00000469923 ATP5LO75964 103 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms