RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.59
BRAT1-204ENST00000469750 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.59
BRAT1-204ENST00000469750 PLAC8L1A1L4L8 177 aa11.33□□□□□ -0.6
BRAT1-204ENST00000469750 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
BRAT1-204ENST00000469750 FHL2Q14192 279 aa11.33□□□□□ -0.6
BRAT1-204ENST00000469750 SPINK6Q6UWN8 80 aa11.33□□□□□ -0.6
BRAT1-204ENST00000469750 Q6ZTC4 211 aa11.31□□□□□ -0.6
BRAT1-204ENST00000469750 PRO0628Q9UI54 55 aa11.31□□□□□ -0.6
BRAT1-204ENST00000469750 ANKRD11Q6UB99 2663 aaPredicted RBP11.31□□□□□ -0.6
BRAT1-204ENST00000469750 IGLV4-60A0A075B6I1 120 aa11.31□□□□□ -0.6
BRAT1-204ENST00000469750 TRAV7A0A075B6U4 112 aa11.3□□□□□ -0.6
BRAT1-204ENST00000469750 CPAMD8Q8IZJ3 1885 aa11.3□□□□□ -0.6
BRAT1-204ENST00000469750 BEAN1Q3B7T3 259 aa11.3□□□□□ -0.6
BRAT1-204ENST00000469750 K7ERS5 55 aa11.29□□□□□ -0.6
BRAT1-204ENST00000469750 COX6A2Q02221 97 aa11.28□□□□□ -0.6
BRAT1-204ENST00000469750 WFDC13Q8IUB5 93 aa11.28□□□□□ -0.6
BRAT1-204ENST00000469750 IGLV9-49A0A0B4J1Y8 123 aa11.27□□□□□ -0.6
BRAT1-204ENST00000469750 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.61
BRAT1-204ENST00000469750 C9orf116Q5BN46 136 aaPredicted RBP11.27□□□□□ -0.61
BRAT1-204ENST00000469750 EML5Q05BV3 1969 aa11.27□□□□□ -0.61
BRAT1-204ENST00000469750 AMELXQ99217 191 aa11.26□□□□□ -0.61
BRAT1-204ENST00000469750 SOSTDC1Q6X4U4 206 aa11.25□□□□□ -0.61
BRAT1-204ENST00000469750 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
BRAT1-204ENST00000469750 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
BRAT1-204ENST00000469750 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
BRAT1-204ENST00000469750 USP9YO00507 2555 aaPredicted RBP11.24□□□□□ -0.61
BRAT1-204ENST00000469750 TSPEAR-AS2P59090 65 aa11.24□□□□□ -0.61
BRAT1-204ENST00000469750 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
BRAT1-204ENST00000469750 Q6ZSN1 163 aa11.23□□□□□ -0.61
BRAT1-204ENST00000469750 LRRK2Q5S007 2527 aa11.23□□□□□ -0.61
BRAT1-204ENST00000469750 RPL28P46779 137 aaKnown RBP11.22□□□□□ -0.61
BRAT1-204ENST00000469750 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
BRAT1-204ENST00000469750 SETD2Q9BYW2 2564 aaPredicted RBP11.22□□□□□ -0.61
BRAT1-204ENST00000469750 PCNTO95613 3336 aa11.21□□□□□ -0.61
BRAT1-204ENST00000469750 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
BRAT1-204ENST00000469750 PRR4Q16378 134 aa11.21□□□□□ -0.62
BRAT1-204ENST00000469750 EXPH5Q8NEV8 1989 aa11.2□□□□□ -0.62
BRAT1-204ENST00000469750 Q8N814 137 aa11.2□□□□□ -0.62
BRAT1-204ENST00000469750 A0A096LNJ9 63 aa11.2□□□□□ -0.62
BRAT1-204ENST00000469750 REG3GQ6UW15 175 aa11.2□□□□□ -0.62
BRAT1-204ENST00000469750 ADAMTS20P59510 1910 aa11.2□□□□□ -0.62
BRAT1-204ENST00000469750 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
BRAT1-204ENST00000469750 LYPD5Q6UWN5 251 aa11.19□□□□□ -0.62
BRAT1-204ENST00000469750 F8WDY8 70 aa11.18□□□□□ -0.62
BRAT1-204ENST00000469750 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
BRAT1-204ENST00000469750 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
BRAT1-204ENST00000469750 Q8N2B8 174 aa11.18□□□□□ -0.62
BRAT1-204ENST00000469750 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
BRAT1-204ENST00000469750 A0A087WVE0 104 aa11.17□□□□□ -0.62
BRAT1-204ENST00000469750 IGLV5-52A0A0A0MRZ9 124 aa11.17□□□□□ -0.62
BRAT1-204ENST00000469750 C1orf137Q5JT78 98 aa11.17□□□□□ -0.62
BRAT1-204ENST00000469750 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
BRAT1-204ENST00000469750 PRYO14603 147 aa11.15□□□□□ -0.63
BRAT1-204ENST00000469750 Q8N9L7 120 aa11.15□□□□□ -0.63
BRAT1-204ENST00000469750 A0A087WYN8 130 aa11.14□□□□□ -0.63
BRAT1-204ENST00000469750 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
BRAT1-204ENST00000469750 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
BRAT1-204ENST00000469750 RPS28P62857 69 aaKnown RBP11.14□□□□□ -0.63
BRAT1-204ENST00000469750 FAM30AQ9NZY2 134 aa11.13□□□□□ -0.63
BRAT1-204ENST00000469750 KIF25-AS1Q9Y6Z4 181 aa11.13□□□□□ -0.63
BRAT1-204ENST00000469750 C11orf72Q8NBR9 251 aa11.12□□□□□ -0.63
BRAT1-204ENST00000469750 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
BRAT1-204ENST00000469750 ZNF462Q96JM2 2506 aa11.11□□□□□ -0.63
BRAT1-204ENST00000469750 PSPHP1O15172 72 aa11.1□□□□□ -0.63
BRAT1-204ENST00000469750 AGRNO00468 2067 aa11.1□□□□□ -0.63
BRAT1-204ENST00000469750 C1orf134Q5TEV5 83 aa11.1□□□□□ -0.63
BRAT1-204ENST00000469750 FHL3Q13643 280 aa11.09□□□□□ -0.63
BRAT1-204ENST00000469750 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
BRAT1-204ENST00000469750 PKD1L2Q7Z442 2459 aa11.09□□□□□ -0.63
BRAT1-204ENST00000469750 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
BRAT1-204ENST00000469750 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
BRAT1-204ENST00000469750 CRYGAP11844 174 aa11.08□□□□□ -0.64
BRAT1-204ENST00000469750 CELA1Q9UNI1 258 aa11.08□□□□□ -0.64
BRAT1-204ENST00000469750 Q6ZRU5 148 aa11.07□□□□□ -0.64
BRAT1-204ENST00000469750 Q9BRP9 147 aa11.07□□□□□ -0.64
BRAT1-204ENST00000469750 C4orf26Q17RF5 130 aa11.05□□□□□ -0.64
BRAT1-204ENST00000469750 VPREB1P12018 145 aa11.05□□□□□ -0.64
BRAT1-204ENST00000469750 HTTP42858 3142 aa11.05□□□□□ -0.64
BRAT1-204ENST00000469750 ESRGQ1W209 222 aa11.05□□□□□ -0.64
BRAT1-204ENST00000469750 MTORP42345 2549 aa11.04□□□□□ -0.64
BRAT1-204ENST00000469750 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
BRAT1-204ENST00000469750 Q8N3U1 123 aa11.02□□□□□ -0.64
BRAT1-204ENST00000469750 LINC00575Q6W349 94 aa11.02□□□□□ -0.64
BRAT1-204ENST00000469750 TET2Q6N021 2002 aaPredicted RBP11.02□□□□□ -0.65
BRAT1-204ENST00000469750 LINC00315P59091 139 aa11.02□□□□□ -0.65
BRAT1-204ENST00000469750 TMEM254Q8TBM7 123 aa11.01□□□□□ -0.65
BRAT1-204ENST00000469750 IGLV5-39A0A0G2JS06 123 aa11.01□□□□□ -0.65
BRAT1-204ENST00000469750 IGHV6-1A0A0B4J1U7 121 aa11.01□□□□□ -0.65
BRAT1-204ENST00000469750 LINC00337Q8N6G1 96 aa11.01□□□□□ -0.65
BRAT1-204ENST00000469750 FASNP49327 2511 aaKnown RBP11□□□□□ -0.65
BRAT1-204ENST00000469750 A0A087WSZ3 146 aa11□□□□□ -0.65
BRAT1-204ENST00000469750 LINC00208Q96KT6 92 aa11□□□□□ -0.65
BRAT1-204ENST00000469750 LINC01546A6NGU7 62 aa11□□□□□ -0.65
BRAT1-204ENST00000469750 IGHV3OR16-9A0A0B4J2B5 98 aa10.99□□□□□ -0.65
BRAT1-204ENST00000469750 COL4A2P08572 1712 aa10.99□□□□□ -0.65
BRAT1-204ENST00000469750 A8MTW9 85 aa10.99□□□□□ -0.65
BRAT1-204ENST00000469750 SERTAD4-AS1Q5TG53 156 aa10.98□□□□□ -0.65
BRAT1-204ENST00000469750 CHD7Q9P2D1 2997 aa10.98□□□□□ -0.65
BRAT1-204ENST00000469750 LINC01547P58512 204 aaPredicted RBP10.98□□□□□ -0.65
BRAT1-204ENST00000469750 RANBP2P49792 3224 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms