RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 GVQW2A0A096LPI5 108 aaPredicted RBP5.37□□□□□ -1.55
HDAC6-216ENST00000468949 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.37□□□□□ -1.55
HDAC6-216ENST00000468949 TMEM223A0PJW6 202 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 LGALS3P17931 250 aaKnown RBP5.37□□□□□ -1.55
HDAC6-216ENST00000468949 CXCL5P42830 114 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 KRTAP26-1Q6PEX3 210 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 CAMK2N2Q96S95 79 aa5.37□□□□□ -1.55
HDAC6-216ENST00000468949 NDUFA1O15239 70 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 RTL8CO15255 209 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
HDAC6-216ENST00000468949 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 Q8IZM0 81 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 Q8N814 137 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 MAPKAPK5-AS1Q8N8E1 139 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
HDAC6-216ENST00000468949 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
HDAC6-216ENST00000468949 FAT2Q9NYQ8 4349 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 F8WDY8 70 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 LEPROTO15243 131 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 NMUP48645 174 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 CARD19Q96LW7 228 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 VAMP8Q9BV40 100 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 PKIGQ9Y2B9 76 aa5.35□□□□□ -1.55
HDAC6-216ENST00000468949 IGLV5-52A0A0A0MRZ9 124 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 IGLV5-39A0A0G2JS06 123 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 A0A1B0GVY2 172 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 LRCOL1A6NCL2 159 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 E9PLD3 99 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 SYCNQ0VAF6 134 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 WFDC2Q14508 124 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 STPG4Q8N801 248 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 NTN5Q8WTR8 489 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-216ENST00000468949 LINC00526Q96FQ7 95 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 C2orf48Q96LS8 159 aa5.34□□□□□ -1.55
HDAC6-216ENST00000468949 HECTD4Q9Y4D8 3996 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 J3QQQ9 107 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 PAM16Q9Y3D7 125 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 HERC2O95714 4834 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 DNAH11Q96DT5 4516 aa5.33□□□□□ -1.56
HDAC6-216ENST00000468949 HERV-K104P63124 156 aa5.32□□□□□ -1.56
HDAC6-216ENST00000468949 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
HDAC6-216ENST00000468949 PYY3Q5JQD4 70 aa5.32□□□□□ -1.56
HDAC6-216ENST00000468949 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
HDAC6-216ENST00000468949 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
HDAC6-216ENST00000468949 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
HDAC6-216ENST00000468949 ZNF815PA8K554 130 aa5.31□□□□□ -1.56
HDAC6-216ENST00000468949 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
HDAC6-216ENST00000468949 RPL18AQ02543 176 aaKnown RBP5.31□□□□□ -1.56
HDAC6-216ENST00000468949 SCGB1D4Q6XE38 83 aa5.31□□□□□ -1.56
HDAC6-216ENST00000468949 Q6ZRU5 148 aa5.31□□□□□ -1.56
HDAC6-216ENST00000468949 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
HDAC6-216ENST00000468949 CIRBPQ14011 172 aaKnown RBP5.3□□□□□ -1.56
HDAC6-216ENST00000468949 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
HDAC6-216ENST00000468949 UNQ6190/PRO20217Q6UXQ8 127 aa5.3□□□□□ -1.56
HDAC6-216ENST00000468949 ZNF625Q96I27 306 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-216ENST00000468949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-216ENST00000468949 LOC107984640A0A0U1RRK4 108 aa5.29□□□□□ -1.56
HDAC6-216ENST00000468949 PFN2P35080 140 aa5.29□□□□□ -1.56
HDAC6-216ENST00000468949 LINC00158P58513 81 aa5.29□□□□□ -1.56
HDAC6-216ENST00000468949 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
HDAC6-216ENST00000468949 IGKV2D-26A0A0A0MRZ7 120 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 C16orf90A8MZG2 172 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 GCSHP23434 173 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 RNF151Q2KHN1 245 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 MIEN1Q9BRT3 115 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
HDAC6-216ENST00000468949 PKD1P98161 4303 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 A0A0U1RRA0 63 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 TMEM238C9JI98 176 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 NDUFC2-KCTD14E9PQ53 114 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 FUSP35637 526 aaKnown RBP eCLIP5.27□□□□□ -1.57
HDAC6-216ENST00000468949 GAGE2BQ13066 116 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 COX17Q14061 63 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 C9orf163Q8N9P6 203 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 DPH3Q96FX2 82 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
HDAC6-216ENST00000468949 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 A0A1B0GV90 55 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 COX8AP10176 69 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 KRTAP10-2P60368 255 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 GAGE2EQ4V326 116 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
HDAC6-216ENST00000468949 PCP2Q8IVA1 136 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 COPS9Q8WXC6 57 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 C14orf144Q96I85 54 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 GAGE2DQ9UEU5 116 aa5.26□□□□□ -1.57
HDAC6-216ENST00000468949 SLPIP03973 132 aa5.25□□□□□ -1.57
HDAC6-216ENST00000468949 SMIM13P0DJ93 91 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms