RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 HIST1H2BBP33778 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BDP58876 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BCP62807 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 CCL20P78556 96 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 MIAQ16674 131 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST2H2BEQ16778 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.99□□□□□ -2.09
GPNMB-207ENST00000468723 TMEM78Q5T7P6 136 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 GOLT1AQ6ZVE7 132 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 WFDC10BQ8IUB3 73 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 C15orf53Q8NAA6 179 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 DEFB104AQ8WTQ1 72 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 S100ZQ8WXG8 99 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BHQ93079 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 IMMP2LQ96T52 175 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 PFDN5Q99471 154 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BNQ99877 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 HIST1H2BMQ99879 126 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 CCDC32Q9BV29 185 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 GGACTQ9BVM4 153 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 SH3BGRL3Q9H299 93 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 XAGE1AQ9HD64 81 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 CYSLTR1Q9Y271 337 aa1.99□□□□□ -2.09
GPNMB-207ENST00000468723 FXYD6-FXYD2A0A087WZ82 144 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 MUC21A0A0G2JKD1 596 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 MUC21A0A140T8X8 626 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 FNDC10F2Z333 226 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 H3BT86 120 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 SPINK4O60575 86 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 P0C880 135 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 ARL14EPLP0DKL9 152 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 SMIM17P0DL12 118 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 ZNF80P51504 273 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-207ENST00000468723 MEF2BQ02080 365 aaPredicted RBP1.98□□□□□ -2.09
GPNMB-207ENST00000468723 SAMD13Q5VXD3 122 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 RPL7L1Q6DKI1 246 aaKnown RBP1.98□□□□□ -2.09
GPNMB-207ENST00000468723 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 LYPD5Q6UWN5 251 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 DPPA3Q6W0C5 159 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 OR2T35Q8NGX2 323 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 DERL1Q9BUN8 251 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 TMEM14CQ9P0S9 112 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 NAT8Q9UHE5 227 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 HHLA3Q9XRX5 114 aa1.98□□□□□ -2.09
GPNMB-207ENST00000468723 PKHD1P08F94 4074 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 IFNA7P01567 189 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 C1QBP02746 253 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 GCHFRP30047 84 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 SRIP30626 198 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 CRYBA4P53673 196 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 DNAJC30Q96LL9 226 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 ZNF471Q9BX82 626 aaPredicted RBP1.97□□□□□ -2.09
GPNMB-207ENST00000468723 MRPL32Q9BYC8 188 aaKnown RBP1.97□□□□□ -2.09
GPNMB-207ENST00000468723 OTORQ9NRC9 128 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
GPNMB-207ENST00000468723 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 H3BVH4 76 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 IFNA1P01562 189 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
GPNMB-207ENST00000468723 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
GPNMB-207ENST00000468723 IBA57Q5T440 356 aaKnown RBP1.96□□□□□ -2.1
GPNMB-207ENST00000468723 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 SMIM20Q8N5G0 67 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 SS18L2Q9UHA2 77 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 PRO0255Q9UI72 69 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
GPNMB-207ENST00000468723 TRAV4A0A0B4J268 109 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 TRAV21A0A0B4J279 112 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 M0R2P5 195 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 ARPC5O15511 151 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 ZNF73O43830 326 aaPredicted RBP1.95□□□□□ -2.1
GPNMB-207ENST00000468723 PPBPP02775 128 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 TCRAP04437 139 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 S100A4P26447 101 aaKnown RBP1.95□□□□□ -2.1
GPNMB-207ENST00000468723 RAB14P61106 215 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 PDE6HQ13956 83 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 WFDC2Q14508 124 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 FAM74A1Q5RGS3 127 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 AKR1C8PQ5T2L2 129 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 CFAP126Q5VTH2 177 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 Q6AWC8 147 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 CLPSL2Q6UWE3 100 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 OR13C6PQ8NH95 151 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 ZC2HC1AQ96GY0 325 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 C20orf166-AS1Q96NR2 134 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 LY96Q9Y6Y9 160 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
GPNMB-207ENST00000468723 A0A087WTM6 91 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 BORCS7-ASMTA0A0B4J1R7 106 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 CTXND1A0A1B0GTU2 59 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 RBAKDNA6NC62 111 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 MAP1LC3B2A6NCE7 125 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
GPNMB-207ENST00000468723 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
GPNMB-207ENST00000468723 EVI2AP22794 236 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms