RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CSMD2Q7Z408 3487 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 TRAV13-2A0A0B4J235 113 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 HMGN4O00479 90 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 TMEM78Q5T7P6 136 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 MIC13Q5XKP0 118 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 MRPL54Q6P161 138 aaKnown RBP-2.71□□□□□ -2.84
SSB-208ENST00000468600 C5orf38Q86SI9 138 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 THEM6Q8WUY1 208 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 MGST2Q99735 147 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 BANF2Q9H503 90 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 NXT2Q9NPJ8 142 aaKnown RBP-2.71□□□□□ -2.84
SSB-208ENST00000468600 LSM2Q9Y333 95 aaKnown RBP-2.71□□□□□ -2.84
SSB-208ENST00000468600 C1orf167Q5SNV9 1468 aa-2.71□□□□□ -2.84
SSB-208ENST00000468600 SPAARA0A1B0GVQ0 90 aa-2.72□□□□□ -2.84
SSB-208ENST00000468600 A0A1W2PRE2 83 aa-2.72□□□□□ -2.84
SSB-208ENST00000468600 PAEPP09466 180 aa-2.72□□□□□ -2.84
SSB-208ENST00000468600 SMG6Q86US8 1419 aaKnown RBP-2.72□□□□□ -2.84
SSB-208ENST00000468600 SPTSSAQ969W0 71 aa-2.72□□□□□ -2.84
SSB-208ENST00000468600 ABCC10Q5T3U5 1492 aa-2.72□□□□□ -2.85
SSB-208ENST00000468600 NWD2Q9ULI1 1742 aa-2.73□□□□□ -2.85
SSB-208ENST00000468600 NDUFA3O95167 84 aa-2.73□□□□□ -2.85
SSB-208ENST00000468600 TMEM191AQ9H0A3 160 aa-2.73□□□□□ -2.85
SSB-208ENST00000468600 NLRP1Q9C000 1473 aa-2.73□□□□□ -2.85
SSB-208ENST00000468600 MBD5Q9P267 1494 aa-2.73□□□□□ -2.85
SSB-208ENST00000468600 RIMS1Q86UR5 1692 aaKnown RBP-2.73□□□□□ -2.85
SSB-208ENST00000468600 PIGBOS1A0A0B4J2F0 54 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 NDUFB6O95139 128 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 C9orf153Q5TBE3 101 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 SAR1AQ9NR31 198 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 MYH3P11055 1940 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 KDM5CP41229 1560 aa-2.74□□□□□ -2.85
SSB-208ENST00000468600 EIF3AQ14152 1382 aaKnown RBP-2.74□□□□□ -2.85
SSB-208ENST00000468600 TRBV20-1A0A075B6N2 111 aa-2.75□□□□□ -2.85
SSB-208ENST00000468600 MMP24-AS1A0A0U1RRL7 71 aa-2.75□□□□□ -2.85
SSB-208ENST00000468600 PFDN1O60925 122 aa-2.75□□□□□ -2.85
SSB-208ENST00000468600 MT-ND4LP03901 98 aa-2.75□□□□□ -2.85
SSB-208ENST00000468600 MRPS25P82663 173 aaKnown RBP-2.75□□□□□ -2.85
SSB-208ENST00000468600 PSMG3Q9BT73 122 aaPredicted RBP-2.75□□□□□ -2.85
SSB-208ENST00000468600 QRICH2Q9H0J4 1663 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 MGAQ8IWI9 3026 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 XRN1Q8IZH2 1706 aaKnown RBP-2.76□□□□□ -2.85
SSB-208ENST00000468600 MAGI2Q86UL8 1455 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 PLEKHH2Q8IVE3 1493 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 IFT140Q96RY7 1462 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 A0A1B0GWA3 101 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 TMEM244Q5VVB8 128 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 C6orf201Q7Z4U5 140 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 TCTE3Q8IZS6 198 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 DEFB106AQ8N104 65 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 MNS1Q8NEH6 495 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 MAGOHBQ96A72 148 aaKnown RBP-2.76□□□□□ -2.85
SSB-208ENST00000468600 CCDC115Q96NT0 180 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 ARL2-SNX15V9GYD0 113 aa-2.76□□□□□ -2.85
SSB-208ENST00000468600 PRG4Q92954 1404 aaPredicted RBP-2.76□□□□□ -2.85
SSB-208ENST00000468600 DOCK2Q92608 1830 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 MYH13Q9UKX3 1938 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 PRUNE2Q8WUY3 3088 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 DPM2O94777 84 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 SERPINB1P30740 379 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 COX6B2Q6YFQ2 88 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 FAM223AQ8IWN6 122 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 BOLA2Q9H3K6 86 aa-2.77□□□□□ -2.85
SSB-208ENST00000468600 FREM2Q5SZK8 3169 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 TRBV7-7A0A0K0K1E9 115 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 ASIPP42127 132 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 NCS1P62166 190 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 MYOZ3Q8TDC0 251 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 ANKRD30AQ9BXX3 1397 aa-2.78□□□□□ -2.85
SSB-208ENST00000468600 EDC4Q6P2E9 1401 aaKnown RBP-2.78□□□□□ -2.85
SSB-208ENST00000468600 TSLPQ969D9 159 aa-2.79□□□□□ -2.86
SSB-208ENST00000468600 ANKRD36A6QL64 1941 aa-2.8□□□□□ -2.86
SSB-208ENST00000468600 CHKB-CPT1BH3BT56 60 aa-2.8□□□□□ -2.86
SSB-208ENST00000468600 M0R129 80 aa-2.8□□□□□ -2.86
SSB-208ENST00000468600 MT1FP04733 61 aa-2.8□□□□□ -2.86
SSB-208ENST00000468600 FYCO1Q9BQS8 1478 aa-2.8□□□□□ -2.86
SSB-208ENST00000468600 LRRC37AA6NMS7 1700 aa-2.81□□□□□ -2.86
SSB-208ENST00000468600 UBE2L5PA0A1B0GUS4 154 aa-2.81□□□□□ -2.86
SSB-208ENST00000468600 HOPXQ9BPY8 73 aaPredicted RBP-2.81□□□□□ -2.86
SSB-208ENST00000468600 MYO15AQ9UKN7 3530 aa-2.81□□□□□ -2.86
SSB-208ENST00000468600 A0A0G2JND7 137 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 ARMS2P0C7Q2 107 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 C3orf79P0CE67 100 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 SAA2P0DJI9 122 aaPredicted RBP-2.82□□□□□ -2.86
SSB-208ENST00000468600 SCGB1A1P11684 91 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 GNGT1P63211 74 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 UQCR10Q9UDW1 63 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 PDCD11Q14690 1871 aaKnown RBP-2.82□□□□□ -2.86
SSB-208ENST00000468600 PSME4Q14997 1843 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 ARAP2Q8WZ64 1704 aa-2.82□□□□□ -2.86
SSB-208ENST00000468600 ZNF518AQ6AHZ1 1483 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 TMEM2Q9UHN6 1383 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 LINC00158P58513 81 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 MMGT1Q8N4V1 131 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 PRO3102Q9H379 93 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 TIAM2Q8IVF5 1701 aa-2.83□□□□□ -2.86
SSB-208ENST00000468600 RGPD2P0DJD1 1756 aa-2.84□□□□□ -2.86
SSB-208ENST00000468600 C4AP0C0L4 1744 aa-2.84□□□□□ -2.86
SSB-208ENST00000468600 C4BP0C0L5 1744 aa-2.84□□□□□ -2.86
SSB-208ENST00000468600 UBE2L3P68036 154 aaKnown RBP-2.84□□□□□ -2.86
SSB-208ENST00000468600 HIST1H1AQ02539 215 aaPredicted RBP-2.84□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms