RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 SPAARA0A1B0GVQ0 90 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 GNG3P63215 75 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 C6orf201Q7Z4U5 140 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 CHMP4BQ9H444 224 aaKnown RBP-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 DYNLRB1Q9NP97 96 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 CFAP54Q96N23 3096 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 LRRC37AA6NMS7 1700 aa-1.89□□□□□ -2.71
SHQ1-204ENST00000468347 PREX1Q8TCU6 1659 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 SHROOM2Q13796 1616 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 CEP152O94986 1710 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 SPTY2D1-AS1A0A0U1RR47 76 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 HSBP1L1C9JCN9 74 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 NIPSNAP2O75323 286 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 RPP14O95059 124 aaKnown RBP-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 PAEPP09466 180 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 HSD52Q0P140 79 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 TMED4Q7Z7H5 227 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 MYOZ3Q8TDC0 251 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 PP6455Q8WZ26 134 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 AQP10Q96PS8 301 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 TMEM191AQ9H0A3 160 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 CALML5Q9NZT1 146 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 ATP6V1DQ9Y5K8 247 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 ARL2-SNX15V9GYD0 113 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 TCHHQ07283 1943 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 ADGRL2O95490 1459 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 CCDC141Q6ZP82 1450 aa-1.9□□□□□ -2.71
SHQ1-204ENST00000468347 TARBP1Q13395 1621 aaKnown RBP-1.91□□□□□ -2.71
SHQ1-204ENST00000468347 USP32Q8NFA0 1604 aa-1.91□□□□□ -2.71
SHQ1-204ENST00000468347 SNCGO76070 127 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 ASIPP42127 132 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 PPP1R2P3Q6NXS1 205 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 MRPL54Q6P161 138 aaKnown RBP-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 Q6ZUT4 128 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 C5orf38Q86SI9 138 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 OR13C6PQ8NH95 151 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 THEM6Q8WUY1 208 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 CCDC115Q96NT0 180 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 NXT2Q9NPJ8 142 aaKnown RBP-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 LAMTOR2Q9Y2Q5 125 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 CUL7Q14999 1698 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 PBRM1Q86U86 1689 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 OVOS2A0A0G2JMS6 1433 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 CLIP1P30622 1438 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 DAPK1P53355 1430 aa-1.91□□□□□ -2.72
SHQ1-204ENST00000468347 IFT140Q96RY7 1462 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 FYCO1Q9BQS8 1478 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 EIF3AQ14152 1382 aaKnown RBP-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 TRBV20-1A0A075B6N2 111 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 A0A1W2PRE2 83 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 YPEL1O60688 119 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 PTRHD1Q6GMV3 140 aaKnown RBP-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 DEFB107AQ8IZN7 70 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 TCEAL4Q96EI5 215 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 MGST2Q99735 147 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 PRO1933Q9H354 126 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 TPT1P8Q9HAU6 139 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 FAIMQ9NVQ4 179 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 LINC00474Q9P2X8 69 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 KIF20BQ96Q89 1820 aa-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 EDC4Q6P2E9 1401 aaKnown RBP-1.92□□□□□ -2.72
SHQ1-204ENST00000468347 PLXNC1O60486 1568 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 ANKRD30AQ9BXX3 1397 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 MON2Q7Z3U7 1717 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 CHKB-CPT1BH3BT56 60 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 SMIM24O75264 130 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 IFNA1P01562 189 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 TNP1P09430 55 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 SERPINB1P30740 379 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 SCIMPQ6UWF3 145 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 MNS1Q8NEH6 495 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 SPTSSAQ969W0 71 aa-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 HOPXQ9BPY8 73 aaPredicted RBP-1.93□□□□□ -2.72
SHQ1-204ENST00000468347 PLB1Q6P1J6 1458 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 EHBP1L1Q8N3D4 1523 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 TRBV7-7A0A0K0K1E9 115 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 CCL7P80098 99 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 TMEM78Q5T7P6 136 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 NKIRAS1Q9NYS0 192 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 ROBO1Q9Y6N7 1651 aa-1.94□□□□□ -2.72
SHQ1-204ENST00000468347 TOP2BQ02880 1626 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 CENPEQ02224 2701 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 TMEM2Q9UHN6 1383 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 TMEM238C9JI98 176 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 DPM2O94777 84 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 NDUFB6O95139 128 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 MT1FP04733 61 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 TPM2P07951 284 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 CCDC32Q9BV29 185 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 ARL2BPQ9Y2Y0 163 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 ZNF518AQ6AHZ1 1483 aa-1.95□□□□□ -2.72
SHQ1-204ENST00000468347 QSER1Q2KHR3 1735 aa-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 A0A1B0GWA3 101 aa-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 DEFB130BP0DP73 79 aa-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 DEFB130AP0DP74 79 aa-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 HIST1H1DP16402 221 aaKnown RBP-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 TAC4Q86UU9 113 aa-1.96□□□□□ -2.72
SHQ1-204ENST00000468347 LSM10Q969L4 123 aaKnown RBP-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms