RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SNAPINO95295 136 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
COL4A6-205ENST00000468338 PAPPA-AS1Q5QFB9 102 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 Q6ZN92 141 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 ERASQ7Z444 233 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 SVBPQ8N300 66 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 STPG4Q8N801 248 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 C2orf88Q9BSF0 95 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 LINC01549A6NIU2 74 aa6.98□□□□□ -1.29
COL4A6-205ENST00000468338 FABP9Q0Z7S8 132 aa6.98□□□□□ -1.29
COL4A6-205ENST00000468338 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
COL4A6-205ENST00000468338 NDUFA1O15239 70 aa6.97□□□□□ -1.29
COL4A6-205ENST00000468338 TLX1NBP0CAT3 122 aa6.97□□□□□ -1.29
COL4A6-205ENST00000468338 UBE2V1Q13404 147 aa6.97□□□□□ -1.29
COL4A6-205ENST00000468338 NDUFA5Q16718 116 aa6.97□□□□□ -1.29
COL4A6-205ENST00000468338 YPEL4Q96NS1 127 aa6.97□□□□□ -1.29
COL4A6-205ENST00000468338 OXTP01178 125 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 SEC11AP67812 179 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 GAGE2BQ13066 116 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 URB1-AS1Q96HZ7 61 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 GAGE2DQ9UEU5 116 aa6.96□□□□□ -1.3
COL4A6-205ENST00000468338 A0A0J9YXV3 536 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 HERVK_113P63121 156 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 C7orf33Q8WU49 177 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 CDKN2A-AS1Q9UH64 79 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 TRAPPC1Q9Y5R8 145 aa6.95□□□□□ -1.3
COL4A6-205ENST00000468338 A0A096LNJ9 63 aa6.94□□□□□ -1.3
COL4A6-205ENST00000468338 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
COL4A6-205ENST00000468338 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
COL4A6-205ENST00000468338 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
COL4A6-205ENST00000468338 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 A4D1N5 150 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 PRR3P79522 188 aaKnown RBP6.93□□□□□ -1.3
COL4A6-205ENST00000468338 C9orf116Q5BN46 136 aaPredicted RBP6.93□□□□□ -1.3
COL4A6-205ENST00000468338 Q6ZRP5 223 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 Q8IZM0 81 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 CST9LQ9H4G1 147 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 SMCO4Q9NRQ5 59 aa6.93□□□□□ -1.3
COL4A6-205ENST00000468338 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
COL4A6-205ENST00000468338 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
COL4A6-205ENST00000468338 LINC00614P0C842 121 aa6.92□□□□□ -1.3
COL4A6-205ENST00000468338 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
COL4A6-205ENST00000468338 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
COL4A6-205ENST00000468338 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
COL4A6-205ENST00000468338 PMVKQ15126 192 aa6.91□□□□□ -1.3
COL4A6-205ENST00000468338 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
COL4A6-205ENST00000468338 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
COL4A6-205ENST00000468338 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 HBDP02042 147 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 RAB5BP61020 215 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
COL4A6-205ENST00000468338 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
COL4A6-205ENST00000468338 PACRGQ96M98 296 aaPredicted RBP6.89□□□□□ -1.31
COL4A6-205ENST00000468338 PRSS2P07478 247 aa6.88□□□□□ -1.31
COL4A6-205ENST00000468338 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
COL4A6-205ENST00000468338 CKS1BP61024 79 aa6.88□□□□□ -1.31
COL4A6-205ENST00000468338 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
COL4A6-205ENST00000468338 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
COL4A6-205ENST00000468338 F8VRH5 84 aa6.87□□□□□ -1.31
COL4A6-205ENST00000468338 CXCL5P42830 114 aa6.87□□□□□ -1.31
COL4A6-205ENST00000468338 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
COL4A6-205ENST00000468338 PHF5AQ7RTV0 110 aaKnown RBP6.87□□□□□ -1.31
COL4A6-205ENST00000468338 CBLN2Q8IUK8 224 aa6.87□□□□□ -1.31
COL4A6-205ENST00000468338 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
COL4A6-205ENST00000468338 ATP5LO75964 103 aa6.86□□□□□ -1.31
COL4A6-205ENST00000468338 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
COL4A6-205ENST00000468338 SPINK6Q6UWN8 80 aa6.86□□□□□ -1.31
COL4A6-205ENST00000468338 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
COL4A6-205ENST00000468338 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
COL4A6-205ENST00000468338 TNXBP22105 4242 aa6.85□□□□□ -1.31
COL4A6-205ENST00000468338 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
COL4A6-205ENST00000468338 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
COL4A6-205ENST00000468338 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
COL4A6-205ENST00000468338 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
COL4A6-205ENST00000468338 ZNF22P17026 224 aaPredicted RBP6.84□□□□□ -1.31
COL4A6-205ENST00000468338 H3BRM9 83 aa6.83□□□□□ -1.32
COL4A6-205ENST00000468338 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
COL4A6-205ENST00000468338 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
COL4A6-205ENST00000468338 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
COL4A6-205ENST00000468338 COLCA2A8K830 154 aa6.82□□□□□ -1.32
COL4A6-205ENST00000468338 TRGC2P03986 189 aa6.82□□□□□ -1.32
COL4A6-205ENST00000468338 NDUFA6P56556 154 aa6.82□□□□□ -1.32
COL4A6-205ENST00000468338 BAGE3Q86Y29 109 aa6.82□□□□□ -1.32
COL4A6-205ENST00000468338 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
COL4A6-205ENST00000468338 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
COL4A6-205ENST00000468338 M0QXV9 152 aa6.81□□□□□ -1.32
COL4A6-205ENST00000468338 Q75L30 129 aa6.81□□□□□ -1.32
COL4A6-205ENST00000468338 XAGE1AQ9HD64 81 aa6.81□□□□□ -1.32
COL4A6-205ENST00000468338 IGLV7-43P04211 117 aa6.8□□□□□ -1.32
COL4A6-205ENST00000468338 C1orf137Q5JT78 98 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms