RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SPAG11AQ6PDA7 123 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 UNQ6190/PRO20217Q6UXQ8 127 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 C5orf38Q86SI9 138 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 GATD1Q8NB37 220 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 STOML3Q8TAV4 291 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 RPL39LQ96EH5 51 aaKnown RBP2.26□□□□□ -2.05
SSR3-204ENST00000467733 FAM210AQ96ND0 272 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 TNFSF18Q9UNG2 199 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 ALG5Q9Y673 324 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 TRBV30A0A0K0K1B3 111 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 C7orf77A4D0Y5 90 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 NDUFC2-KCTD14E9PQ53 114 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 F2Z2F3 143 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 I3L3M4 83 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 RPS20P60866 119 aaKnown RBP2.25□□□□□ -2.05
SSR3-204ENST00000467733 IFITM3Q01628 133 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 Q5BKY6 102 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 BAGE2Q86Y30 109 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 CCDC32Q9BV29 185 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 TMEM242Q9NWH2 141 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 UBE2D4Q9Y2X8 147 aa2.25□□□□□ -2.05
SSR3-204ENST00000467733 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
SSR3-204ENST00000467733 TRBV6-5A0A0K0K1A5 114 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 A0A1B0GV50 99 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 XKRY2A2RUG3 117 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 MAP1LC3B2A6NCE7 125 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 INMT-MINDY4F8WBC2 141 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 PMCHP20382 165 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 SMAGPQ0VAQ4 97 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 RNASE13Q5GAN3 156 aaKnown RBP2.24□□□□□ -2.05
SSR3-204ENST00000467733 TEX261Q6UWH6 196 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 LYZL1Q6UWQ5 148 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 Q6ZUT4 128 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 MRPL55Q7Z7F7 128 aaKnown RBP2.24□□□□□ -2.05
SSR3-204ENST00000467733 C3orf22Q8N5N4 141 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 DAND5Q8N907 189 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 ENKURQ8TC29 256 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
SSR3-204ENST00000467733 CNFNQ9BYD5 112 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 MAP1LC3BQ9GZQ8 125 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 CYTL1Q9NRR1 136 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 NDUFA12Q9UI09 145 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 C22orf24Q9Y442 160 aa2.24□□□□□ -2.05
SSR3-204ENST00000467733 CSDC2Q9Y534 153 aaKnown RBP2.24□□□□□ -2.05
SSR3-204ENST00000467733 IGHV3OR16-9A0A0B4J2B5 98 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 SSNA1O43805 119 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 UBE2AP49459 152 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 RPL32P62910 135 aaKnown RBP2.23□□□□□ -2.05
SSR3-204ENST00000467733 KIAA0087Q14695 138 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 CEND1Q8N111 149 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
SSR3-204ENST00000467733 RNASE7Q9H1E1 156 aaKnown RBP2.23□□□□□ -2.05
SSR3-204ENST00000467733 TRBV27A0A0K0K1C4 114 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 RAB19A4D1S5 217 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 PFDN1O60925 122 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 IFNA1P01562 189 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 RPL35P42766 123 aaKnown RBP2.22□□□□□ -2.05
SSR3-204ENST00000467733 FOXA3P55318 350 aaPredicted RBP2.22□□□□□ -2.05
SSR3-204ENST00000467733 AKR1C8PQ5T2L2 129 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 RPL7L1Q6DKI1 246 aaKnown RBP2.22□□□□□ -2.05
SSR3-204ENST00000467733 PP632Q6XCG6 107 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 SMIM15Q7Z3B0 74 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 LINC00469Q8N7U9 141 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 TIMM21Q9BVV7 248 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 ST20Q9HBF5 79 aa2.22□□□□□ -2.05
SSR3-204ENST00000467733 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
SSR3-204ENST00000467733 TGIF2-C20orf24A0A0A6YYL0 155 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 ZNF727A8MUV8 499 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 E9PLD3 99 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 KRTAP4-16G5E9R7 235 aaPredicted RBP2.21□□□□□ -2.06
SSR3-204ENST00000467733 UPK1BO75841 260 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 SPINK1P00995 79 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 FCER1GP30273 86 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 POLR2KP53803 58 aaKnown RBP2.21□□□□□ -2.06
SSR3-204ENST00000467733 PCOTHQ58A44 107 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 CENPWQ5EE01 88 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 C2orf82Q6UX34 121 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 C9orf62Q8N4C0 152 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 SMIM12Q96EX1 92 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 XAGE1AQ9HD64 81 aa2.21□□□□□ -2.06
SSR3-204ENST00000467733 BORCS7-ASMTA0A0B4J1R7 106 aa2.2□□□□□ -2.06
SSR3-204ENST00000467733 SMLR1H3BR10 107 aa2.2□□□□□ -2.06
SSR3-204ENST00000467733 RPS29P62273 56 aaKnown RBP2.2□□□□□ -2.06
SSR3-204ENST00000467733 PRLHP81277 87 aa2.2□□□□□ -2.06
SSR3-204ENST00000467733 MARVELD1Q9BSK0 173 aa2.2□□□□□ -2.06
SSR3-204ENST00000467733 FXYD6-FXYD2A0A087WZ82 144 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 A0A0U1RRA0 63 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 GNG4P50150 75 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 HBBP68871 147 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 MRPS36P82909 103 aaKnown RBP2.19□□□□□ -2.06
SSR3-204ENST00000467733 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 FAM104AQ969W3 186 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 PLEKHB2Q96CS7 222 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 GNB1LQ9BYB4 327 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 SPANXA1Q9NS26 97 aa2.19□□□□□ -2.06
SSR3-204ENST00000467733 ARPC5O15511 151 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms