RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 TSPAN13O95857 204 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 C9orf129Q5T035 196 aaKnown RBP3.24□□□□□ -1.89
CXXC4-202ENST00000466963 TEX43Q6ZNM6 134 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 FAM213BQ8TBF2 198 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 TMEM141Q96I45 108 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 MED9Q9NWA0 146 aa3.24□□□□□ -1.89
CXXC4-202ENST00000466963 TRBV20OR9-2A0A075B6H5 130 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 ALKAL2Q6UX46 152 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 C5orf38Q86SI9 138 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 RPL39LQ96EH5 51 aaKnown RBP3.23□□□□□ -1.89
CXXC4-202ENST00000466963 SMIM2Q9BVW6 85 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 A0A087X002 238 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 LINC00587B1AMM8 73 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 ORMDL2Q53FV1 153 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 ATP5L2Q7Z4Y8 100 aa3.23□□□□□ -1.89
CXXC4-202ENST00000466963 PRYO14603 147 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 PNRC1Q12796 327 aaPredicted RBP3.22□□□□□ -1.89
CXXC4-202ENST00000466963 GAGE2EQ4V326 116 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 Q6ZUT4 128 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 GAGE2DQ9UEU5 116 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 NAT8BQ9UHF3 227 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 FXYD6-FXYD2A0A087WZ82 144 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 BLOC1S1P78537 153 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 FAM104BQ5XKR9 115 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 AMELXQ99217 191 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 RAB5AP20339 215 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 CD164Q04900 197 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 Q5BKY6 102 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
CXXC4-202ENST00000466963 TMEM238C9JI98 176 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 ANKRD39Q53RE8 183 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 TIMM17AQ99595 171 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 OPRPNQ99935 248 aaPredicted RBP3.21□□□□□ -1.9
CXXC4-202ENST00000466963 EIF5A2Q9GZV4 153 aaKnown RBP3.21□□□□□ -1.9
CXXC4-202ENST00000466963 SPRR4Q96PI1 79 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 GNG13Q9P2W3 67 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
CXXC4-202ENST00000466963 H3BRM9 83 aa3.2□□□□□ -1.9
CXXC4-202ENST00000466963 Q5XG85 94 aa3.2□□□□□ -1.9
CXXC4-202ENST00000466963 RETNLBQ9BQ08 111 aa3.2□□□□□ -1.9
CXXC4-202ENST00000466963 IGLV5-45A0A087WSX0 123 aa3.2□□□□□ -1.9
CXXC4-202ENST00000466963 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
CXXC4-202ENST00000466963 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 VCX2Q9H322 139 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 FAM168BA1KXE4 195 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 NXT2Q9NPJ8 142 aaKnown RBP3.19□□□□□ -1.9
CXXC4-202ENST00000466963 TINCRA0A1B0GVN0 87 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 CKS2P33552 79 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 MT1HP80294 61 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 C10orf25Q5T742 122 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 CBLN2Q8IUK8 224 aa3.19□□□□□ -1.9
CXXC4-202ENST00000466963 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 TRAV9-1A0A075B6T8 112 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 MUC21A0A140T8X8 626 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 HIGD1CA8MV81 97 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 ATP5LO75964 103 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 ORMDL3Q8N138 153 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 Q8N377 158 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 OCC1Q8TAD7 63 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 PLEKHB2Q96CS7 222 aa3.18□□□□□ -1.9
CXXC4-202ENST00000466963 SLC51BQ86UW2 128 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 TMEM126AQ9H061 195 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 SMIM27A0A1W2PRY6 76 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 M0R378 163 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 C10orf91Q5T1B1 145 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 Q8N8P6 123 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 COX7B2Q8TF08 81 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 MAP1LC3AQ9H492 121 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 BATF3Q9NR55 127 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 ARPC5O15511 151 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 MRPL51Q4U2R6 128 aaKnown RBP3.17□□□□□ -1.9
CXXC4-202ENST00000466963 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
CXXC4-202ENST00000466963 RNASE7Q9H1E1 156 aaKnown RBP3.17□□□□□ -1.9
CXXC4-202ENST00000466963 SPRR1AP35321 89 aa3.16□□□□□ -1.9
CXXC4-202ENST00000466963 JOSD1Q15040 202 aaPredicted RBP3.16□□□□□ -1.9
CXXC4-202ENST00000466963 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
CXXC4-202ENST00000466963 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
CXXC4-202ENST00000466963 Q8NBF4 154 aa3.15□□□□□ -1.9
CXXC4-202ENST00000466963 TRBV10-2A0A0K0K1G8 114 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 K7EN84 100 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 LINC00310P59036 64 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 RAB5BP61020 215 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 COX19Q49B96 90 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 FAM104AQ969W3 186 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 VPREB1P12018 145 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 C6orf99Q4VX62 202 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 AKAP14Q86UN6 197 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
CXXC4-202ENST00000466963 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
CXXC4-202ENST00000466963 LINC01546A6NGU7 62 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms