RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CHD1O14646 1710 aa-0.67□□□□□ -2.52
SMC4-205ENST00000465563 PDCD11Q14690 1871 aaKnown RBP-0.67□□□□□ -2.52
SMC4-205ENST00000465563 F6UZH7 168 aa-0.68□□□□□ -2.52
SMC4-205ENST00000465563 EPG5Q9HCE0 2579 aa-0.68□□□□□ -2.52
SMC4-205ENST00000465563 EIF4G3O43432 1585 aaKnown RBP-0.69□□□□□ -2.52
SMC4-205ENST00000465563 STARD9Q9P2P6 4700 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 USP9YO00507 2555 aaPredicted RBP-0.69□□□□□ -2.52
SMC4-205ENST00000465563 GNG4P50150 75 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 KLK9Q2XQG4 91 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 LINC01600Q96MT4 127 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 TOP2BQ02880 1626 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 C1orf167Q5SNV9 1468 aa-0.69□□□□□ -2.52
SMC4-205ENST00000465563 XRN1Q8IZH2 1706 aaKnown RBP-0.69□□□□□ -2.52
SMC4-205ENST00000465563 ANKRD36A6QL64 1941 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 RYR3Q15413 4870 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 LCN9Q8WX39 176 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 C2orf88Q9BSF0 95 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 A0A0G2JMZ2 1700 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 FMN2Q9NZ56 1722 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 MAPKBP1O60336 1514 aa-0.7□□□□□ -2.52
SMC4-205ENST00000465563 ITPR3Q14573 2671 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 CC2D2AQ9P2K1 1620 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 HYDINQ4G0P3 5121 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 PZPP20742 1482 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 UBA52P62987 128 aaKnown RBP-0.71□□□□□ -2.52
SMC4-205ENST00000465563 PPP3R1P63098 170 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 MANBALQ9NQG1 85 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 ARHGAP5Q13017 1502 aa-0.71□□□□□ -2.52
SMC4-205ENST00000465563 NBPF19A0A087WUL8 3843 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 ABCA3Q99758 1704 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 HECTD1Q9ULT8 2610 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 FAM223BA6NKX1 122 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 SPRR2AP35326 72 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 KRTAP6-2Q3LI66 62 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 PRO1854Q9UHT4 67 aa-0.72□□□□□ -2.52
SMC4-205ENST00000465563 PAPPA2Q9BXP8 1791 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 H3BQ15 152 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 COX6CP09669 75 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 SPRR2EP22531 72 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 SFTA2Q6UW10 78 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 SVBPQ8N300 66 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 TOPAZ1Q8N9V7 1692 aa-0.73□□□□□ -2.53
SMC4-205ENST00000465563 MARF1Q9Y4F3 1742 aaKnown RBP-0.73□□□□□ -2.53
SMC4-205ENST00000465563 PKHD1P08F94 4074 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 TACC2O95359 2948 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 UBR4Q5T4S7 5183 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 SETBP1Q9Y6X0 1596 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 KIAA1109Q2LD37 5005 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 NAP1L6A6NFF2 107 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 LINC00587B1AMM8 73 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 LINC00846Q9NV44 126 aa-0.74□□□□□ -2.53
SMC4-205ENST00000465563 EPPK1P58107 5090 aaKnown RBP-0.74□□□□□ -2.53
SMC4-205ENST00000465563 RYR1P21817 5038 aa-0.75□□□□□ -2.53
SMC4-205ENST00000465563 FASNP49327 2511 aaKnown RBP-0.75□□□□□ -2.53
SMC4-205ENST00000465563 M0R2T5 61 aa-0.75□□□□□ -2.53
SMC4-205ENST00000465563 SPINK4O60575 86 aa-0.75□□□□□ -2.53
SMC4-205ENST00000465563 PRO1933Q9H354 126 aa-0.75□□□□□ -2.53
SMC4-205ENST00000465563 A0A1B0GWA3 101 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 TRAPPC2P0DI81 140 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 TRAPPC2BP0DI82 140 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 FDCSPQ8NFU4 85 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 DEFB105AQ8NG35 78 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 PLEKHH2Q8IVE3 1493 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 LAMA2P24043 3122 aaKnown RBP-0.76□□□□□ -2.53
SMC4-205ENST00000465563 BIRC6Q9NR09 4857 aa-0.76□□□□□ -2.53
SMC4-205ENST00000465563 PCNX1Q96RV3 2341 aa-0.77□□□□□ -2.53
SMC4-205ENST00000465563 SAA2P0DJI9 122 aaPredicted RBP-0.77□□□□□ -2.53
SMC4-205ENST00000465563 S100A1P23297 94 aa-0.77□□□□□ -2.53
SMC4-205ENST00000465563 TMEM203Q969S6 136 aa-0.77□□□□□ -2.53
SMC4-205ENST00000465563 NLRP1Q9C000 1473 aa-0.78□□□□□ -2.53
SMC4-205ENST00000465563 C12orf57Q99622 126 aa-0.78□□□□□ -2.53
SMC4-205ENST00000465563 GNG8Q9UK08 70 aa-0.78□□□□□ -2.53
SMC4-205ENST00000465563 SONP18583 2426 aaKnown RBP-0.78□□□□□ -2.53
SMC4-205ENST00000465563 IQSEC2Q5JU85 1478 aa-0.79□□□□□ -2.54
SMC4-205ENST00000465563 MYO18BQ8IUG5 2567 aa-0.79□□□□□ -2.54
SMC4-205ENST00000465563 DNAH6Q9C0G6 4158 aa-0.79□□□□□ -2.54
SMC4-205ENST00000465563 SARNPP82979 210 aaKnown RBP-0.79□□□□□ -2.54
SMC4-205ENST00000465563 FXYD6Q9H0Q3 95 aa-0.79□□□□□ -2.54
SMC4-205ENST00000465563 FAM135AQ9P2D6 1515 aa-0.8□□□□□ -2.54
SMC4-205ENST00000465563 ABCC5O15440 1437 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 MUC17Q685J3 4493 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 hADV29S1A0JD25 119 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 CRYM-AS1A6NIL9 109 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 SNCAP37840 140 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 USMG5Q96IX5 58 aa-0.81□□□□□ -2.54
SMC4-205ENST00000465563 TMEM262E9PQX1 116 aa-0.82□□□□□ -2.54
SMC4-205ENST00000465563 COX8AP10176 69 aa-0.82□□□□□ -2.54
SMC4-205ENST00000465563 KIAA1551Q9HCM1 1747 aa-0.82□□□□□ -2.54
SMC4-205ENST00000465563 TNRC18O15417 2968 aaPredicted RBP-0.82□□□□□ -2.54
SMC4-205ENST00000465563 ZFYVE16Q7Z3T8 1539 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 HTTP42858 3142 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 SHPRHQ149N8 1683 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 A0A087WVE0 104 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 KRTDAPP60985 99 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 SEC11AP67812 179 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 MRPS10P82664 201 aaKnown RBP-0.83□□□□□ -2.54
SMC4-205ENST00000465563 HSD52Q0P140 79 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 DEFB135Q30KP9 77 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 CGREF1Q99674 301 aa-0.83□□□□□ -2.54
SMC4-205ENST00000465563 TARBP1Q13395 1621 aaKnown RBP-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms