RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 TMEM167BQ9NRX6 74 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 ZNRD1Q9P1U0 126 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 IGLV2-18A0A075B6J9 118 aa2□□□□□ -2.09
SNX4-202ENST00000465505 TRAV40A0A0B4J280 105 aa2□□□□□ -2.09
SNX4-202ENST00000465505 I3L3M4 83 aa2□□□□□ -2.09
SNX4-202ENST00000465505 SPINK4O60575 86 aa2□□□□□ -2.09
SNX4-202ENST00000465505 INSP01308 110 aa2□□□□□ -2.09
SNX4-202ENST00000465505 IGKV1-17P01599 117 aa2□□□□□ -2.09
SNX4-202ENST00000465505 CTSGP08311 255 aa2□□□□□ -2.09
SNX4-202ENST00000465505 P0C879 139 aa2□□□□□ -2.09
SNX4-202ENST00000465505 PRB4P10163 310 aaPredicted RBP2□□□□□ -2.09
SNX4-202ENST00000465505 DEFB114Q30KQ6 69 aa2□□□□□ -2.09
SNX4-202ENST00000465505 DEFB113Q30KQ7 82 aa2□□□□□ -2.09
SNX4-202ENST00000465505 KRTAP25-1Q3LHN0 102 aa2□□□□□ -2.09
SNX4-202ENST00000465505 ENHOQ6UWT2 76 aa2□□□□□ -2.09
SNX4-202ENST00000465505 TTTY12Q9BZ98 90 aa2□□□□□ -2.09
SNX4-202ENST00000465505 ORMDL1Q9P0S3 153 aa2□□□□□ -2.09
SNX4-202ENST00000465505 CUL9Q8IWT3 2517 aa2□□□□□ -2.09
SNX4-202ENST00000465505 COL4A5P29400 1685 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 KNTC1P50748 2209 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 MED13LQ71F56 2210 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 KMT2BQ9UMN6 2715 aaPredicted RBP1.99□□□□□ -2.09
SNX4-202ENST00000465505 IGHV3-64A0A075B6Q5 118 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 TRBV6-1A0A0K0K1D8 114 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 H3BQ85 93 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 TFF1P04155 84 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 FXYD3Q14802 87 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 DMAC1Q96GE9 116 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 UBL5Q9BZL1 73 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 TMEM14AQ9Y6G1 99 aa1.99□□□□□ -2.09
SNX4-202ENST00000465505 SSC5DA1L4H1 1573 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 TRAV21A0A0B4J279 112 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 A0A1B0GU33 70 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 NUPR2A6NF83 97 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 JMJD7-PLA2G4BH0Y9G9 81 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 M0R135 149 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 IGHV3-53P01767 116 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 ARL14EPLP0DKL9 152 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 PDE6GP18545 87 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 Q1RN00 199 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 HCP5Q6MZN7 132 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 Q6ZS52 159 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 COX7B2Q8TF08 81 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 SPRR4Q96PI1 79 aa1.98□□□□□ -2.09
SNX4-202ENST00000465505 F5P12259 2224 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 FAM168BA1KXE4 195 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 M0R1W7 72 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 CCL18P55774 89 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 RPL38P63173 70 aaKnown RBP1.97□□□□□ -2.09
SNX4-202ENST00000465505 SPAG11BQ08648 103 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 C10orf113Q5VZT2 155 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 Q5W150 140 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 SPAG11AQ6PDA7 123 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 LINC00322Q6ZN03 302 aaPredicted RBP1.97□□□□□ -2.09
SNX4-202ENST00000465505 RPS27LQ71UM5 84 aaKnown RBP1.97□□□□□ -2.09
SNX4-202ENST00000465505 C14orf178Q8N769 122 aaPredicted RBP1.97□□□□□ -2.09
SNX4-202ENST00000465505 LINC00208Q96KT6 92 aa1.97□□□□□ -2.09
SNX4-202ENST00000465505 AHCTF1Q8WYP5 2266 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 IGKV3-7A0A075B6H7 116 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 GIG44P09565 113 aaPredicted RBP1.96□□□□□ -2.1
SNX4-202ENST00000465505 C9orf163Q8N9P6 203 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 CNFNQ9BYD5 112 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 PTPRQQ9UMZ3 2332 aa1.96□□□□□ -2.1
SNX4-202ENST00000465505 SORL1Q92673 2214 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 ANKRD17O75179 2603 aaKnown RBP1.95□□□□□ -2.1
SNX4-202ENST00000465505 BRWD1Q9NSI6 2320 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 LOC110117498A0A087WWA1 95 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 CCL3L1P16619 93 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 ZNF137PP52743 207 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 PDE6HQ13956 83 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 LINC01590Q5TEZ4 76 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 FDCSPQ8NFU4 85 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 ZNF625Q96I27 306 aaPredicted RBP1.95□□□□□ -2.1
SNX4-202ENST00000465505 MRPL36Q9P0J6 103 aaKnown RBP1.95□□□□□ -2.1
SNX4-202ENST00000465505 KLK9Q9UKQ9 250 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 KLK12Q9UKR0 248 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 RTTNQ86VV8 2226 aa1.95□□□□□ -2.1
SNX4-202ENST00000465505 USF3Q68DE3 2245 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 LRCOL1A6NCL2 159 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 H0Y9P7 68 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 ZNF861PO60384 105 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 IGLV3-19P01714 112 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 SPINK7P58062 85 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 ERHP84090 104 aaKnown RBP1.94□□□□□ -2.1
SNX4-202ENST00000465505 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 DEFB132Q7Z7B7 95 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 C16orf74Q96GX8 76 aa1.94□□□□□ -2.1
SNX4-202ENST00000465505 H0YGX0 51 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 UQCR11O14957 56 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 NDUFA3O95167 84 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 IGLV7-43P04211 117 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 MGPP08493 103 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 RNF5Q99942 180 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 KCNQ1DNQ9H478 68 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 R4GMQ9 66 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 MINOS1-NBL1R4GNA1 71 aa1.93□□□□□ -2.1
SNX4-202ENST00000465505 URB1O60287 2271 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms