RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 LINC00959A0A1B0GUT2 108 aa9.39□□□□□ -0.91
HDAC6-215ENST00000465457 TIMM17BO60830 172 aa9.39□□□□□ -0.91
HDAC6-215ENST00000465457 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
HDAC6-215ENST00000465457 HERV-K104P63124 156 aa9.38□□□□□ -0.91
HDAC6-215ENST00000465457 COX6A2Q02221 97 aa9.38□□□□□ -0.91
HDAC6-215ENST00000465457 VPS13BQ7Z7G8 4022 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 A0A087WZ39 114 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 EPM2AB3EWF7 344 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 INAFM2P0DMQ5 153 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 FXYD2P54710 66 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 KRTAP10-2P60368 255 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
HDAC6-215ENST00000465457 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
HDAC6-215ENST00000465457 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
HDAC6-215ENST00000465457 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
HDAC6-215ENST00000465457 COPS9Q8WXC6 57 aa9.36□□□□□ -0.91
HDAC6-215ENST00000465457 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
HDAC6-215ENST00000465457 A0A1B0GWB2 263 aa9.35□□□□□ -0.91
HDAC6-215ENST00000465457 ANGP03950 147 aaKnown RBP9.35□□□□□ -0.91
HDAC6-215ENST00000465457 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
HDAC6-215ENST00000465457 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
HDAC6-215ENST00000465457 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
HDAC6-215ENST00000465457 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
HDAC6-215ENST00000465457 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
HDAC6-215ENST00000465457 REG3AQ06141 175 aa9.34□□□□□ -0.91
HDAC6-215ENST00000465457 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
HDAC6-215ENST00000465457 NHP2Q9NX24 153 aaKnown RBP9.34□□□□□ -0.91
HDAC6-215ENST00000465457 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 C9orf118A6NHY6 69 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 IFITM1P13164 125 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 COX7B2Q8TF08 81 aa9.33□□□□□ -0.92
HDAC6-215ENST00000465457 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-215ENST00000465457 NBDYA0A0U1RRE5 68 aa9.32□□□□□ -0.92
HDAC6-215ENST00000465457 MIAQ16674 131 aa9.32□□□□□ -0.92
HDAC6-215ENST00000465457 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-215ENST00000465457 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
HDAC6-215ENST00000465457 Q9H8V8 135 aa9.32□□□□□ -0.92
HDAC6-215ENST00000465457 PRR34Q9NV39 138 aa9.32□□□□□ -0.92
HDAC6-215ENST00000465457 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
HDAC6-215ENST00000465457 XCL1P47992 114 aa9.31□□□□□ -0.92
HDAC6-215ENST00000465457 LITAFQ99732 161 aa9.31□□□□□ -0.92
HDAC6-215ENST00000465457 COX7A2LO14548 114 aa9.3□□□□□ -0.92
HDAC6-215ENST00000465457 CRPP02741 224 aa9.3□□□□□ -0.92
HDAC6-215ENST00000465457 FUSP35637 526 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC6-215ENST00000465457 Q5VSD8 79 aa9.3□□□□□ -0.92
HDAC6-215ENST00000465457 Q8IZM0 81 aa9.3□□□□□ -0.92
HDAC6-215ENST00000465457 CHCHD10Q8WYQ3 142 aaPredicted RBP9.3□□□□□ -0.92
HDAC6-215ENST00000465457 PRSS2P07478 247 aa9.29□□□□□ -0.92
HDAC6-215ENST00000465457 CXCL5P42830 114 aa9.29□□□□□ -0.92
HDAC6-215ENST00000465457 VAMP3Q15836 100 aa9.29□□□□□ -0.92
HDAC6-215ENST00000465457 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
HDAC6-215ENST00000465457 K7EP13 123 aa9.28□□□□□ -0.92
HDAC6-215ENST00000465457 APOMO95445 188 aa9.28□□□□□ -0.92
HDAC6-215ENST00000465457 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
HDAC6-215ENST00000465457 A0A0B4J2C4 111 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 K7ERJ3 54 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 FABP2P12104 132 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 LINC01556Q5JQF7 62 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 CLPSL2Q6UWE3 100 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 GTF2H5Q6ZYL4 71 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
HDAC6-215ENST00000465457 A0A1W2PPM0 123 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 H3BUT2 72 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 MALP21145 153 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 XGP55808 180 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 UBE2V1Q13404 147 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 ESRGQ1W209 222 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 LYRM7Q5U5X0 104 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 KLK12Q9UKR0 248 aa9.26□□□□□ -0.93
HDAC6-215ENST00000465457 A4D1N5 150 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 FOXI1Q12951 378 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 CFAP161Q6P656 301 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 PRO1854Q9UHT4 67 aa9.25□□□□□ -0.93
HDAC6-215ENST00000465457 IGHV3-33P01772 117 aa9.24□□□□□ -0.93
HDAC6-215ENST00000465457 CCL18P55774 89 aa9.24□□□□□ -0.93
HDAC6-215ENST00000465457 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
HDAC6-215ENST00000465457 CFC1BP0CG36 223 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 CFC1P0CG37 223 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 CKS1BP61024 79 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 Q8N3U1 123 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 LINC00588Q9Y4M8 146 aa9.23□□□□□ -0.93
HDAC6-215ENST00000465457 GAGE12HA6NDE8 117 aa9.22□□□□□ -0.93
HDAC6-215ENST00000465457 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
HDAC6-215ENST00000465457 K7EP34 96 aa9.22□□□□□ -0.93
HDAC6-215ENST00000465457 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
HDAC6-215ENST00000465457 UBE2WQ96B02 151 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms