RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 C5orf38Q86SI9 138 aa5.69□□□□□ -1.5
UBE4B-205ENST00000465408 ZNF625Q96I27 306 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-205ENST00000465408 C11orf68Q9H3H3 251 aaKnown RBP5.69□□□□□ -1.5
UBE4B-205ENST00000465408 SPCS1Q9Y6A9 102 aa5.69□□□□□ -1.5
UBE4B-205ENST00000465408 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
UBE4B-205ENST00000465408 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 EIF4EBP3O60516 100 aaPredicted RBP5.68□□□□□ -1.5
UBE4B-205ENST00000465408 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 CFC1P0CG37 223 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 XCL1P47992 114 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
UBE4B-205ENST00000465408 MIAQ16674 131 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 LELP1Q5T871 98 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 DAND5Q8N907 189 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 SPANXDQ9BXN6 97 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 SPANXCQ9NY87 97 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 TOMM7Q9P0U1 55 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
UBE4B-205ENST00000465408 IGHV3OR16-9A0A0B4J2B5 98 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 TSPAN13O95857 204 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 ANGP03950 147 aaKnown RBP5.67□□□□□ -1.5
UBE4B-205ENST00000465408 PRSS2P07478 247 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 SS18Q15532 418 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 GTF2H5Q6ZYL4 71 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 LINC00269Q8N2A0 174 aa5.67□□□□□ -1.5
UBE4B-205ENST00000465408 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
UBE4B-205ENST00000465408 DNAH2Q9P225 4427 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 A0A087WZ39 114 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 TIMM17BO60830 172 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 RPL24P83731 157 aaKnown RBP5.66□□□□□ -1.5
UBE4B-205ENST00000465408 MEIG1Q5JSS6 88 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 SFTA2Q6UW10 78 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 SH2D6Q7Z4S9 175 aa5.66□□□□□ -1.5
UBE4B-205ENST00000465408 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 H7C2G1 150 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 IGHV3-33P01772 117 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 REG3AQ06141 175 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 SPATA25Q9BR10 227 aa5.65□□□□□ -1.5
UBE4B-205ENST00000465408 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
UBE4B-205ENST00000465408 A0A0B4J2C4 111 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 LOC107984156A0A0G2JMH3 177 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
UBE4B-205ENST00000465408 HERV-K104P63124 156 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 CIRBPQ14011 172 aaKnown RBP5.64□□□□□ -1.51
UBE4B-205ENST00000465408 ARL17AQ8IVW1 177 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 CHCHD10Q8WYQ3 142 aaPredicted RBP5.64□□□□□ -1.51
UBE4B-205ENST00000465408 PRO1854Q9UHT4 67 aa5.64□□□□□ -1.51
UBE4B-205ENST00000465408 DEFB131BA0A096LNP1 70 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 IFITM1P13164 125 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 SOSTDC1Q6X4U4 206 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 WFDC10BQ8IUB3 73 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 LINC00308Q8TCZ7 52 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 TM2D3Q9BRN9 247 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 KLK12Q9UKR0 248 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
UBE4B-205ENST00000465408 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 GAGE12HA6NDE8 117 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 H3BNG1 76 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 COX7A2LO14548 114 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 PSMB2P49721 201 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 Q1RN00 199 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 CD164L2Q6UWJ8 174 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
UBE4B-205ENST00000465408 RPL13AP40429 203 aaKnown RBP5.61□□□□□ -1.51
UBE4B-205ENST00000465408 LINC00158P58513 81 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 FOXI1Q12951 378 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 ESRGQ1W209 222 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 C6orf226Q5I0X4 101 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 ENHOQ6UWT2 76 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 C2orf82Q6UX34 121 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 MTURNQ8N3F0 131 aa5.61□□□□□ -1.51
UBE4B-205ENST00000465408 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 PKD1P98161 4303 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 TRAV10A0A0B4J240 114 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 H3BMG7 143 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 MALP21145 153 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 PFN2P35080 140 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 Q8IZM0 81 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 MIR7-3HGQ8N6C7 128 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 UBE2WQ96B02 151 aa5.6□□□□□ -1.51
UBE4B-205ENST00000465408 TCL1BO95988 128 aa5.59□□□□□ -1.51
UBE4B-205ENST00000465408 CRPP02741 224 aa5.59□□□□□ -1.51
UBE4B-205ENST00000465408 CFAP161Q6P656 301 aa5.59□□□□□ -1.51
UBE4B-205ENST00000465408 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
UBE4B-205ENST00000465408 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
UBE4B-205ENST00000465408 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
UBE4B-205ENST00000465408 IBA57-AS1B1ANH7 110 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 CKS1BP61024 79 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 KIAA0087Q14695 138 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
UBE4B-205ENST00000465408 RNF213Q63HN8 5207 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms