RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 DEFB131BA0A096LNP1 70 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 TRAV8-3A0A0A6YYJ7 113 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 TMEM223A0PJW6 202 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 E9PLD3 99 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 M0R143 59 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 UBE2D1P51668 147 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 RBX1P62877 108 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MRPS36P82909 103 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MRPL23Q16540 153 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MPV17L2Q567V2 206 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 LYPD5Q6UWN5 251 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 Q6ZRP5 223 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MRPL52Q86TS9 123 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 BOD1L2Q8IYS8 172 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00469Q8N7U9 141 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 PLEKHB2Q96CS7 222 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 TM2D3Q9BRN9 247 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 C2orf88Q9BSF0 95 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 TIMM21Q9BVV7 248 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 C11orf68Q9H3H3 251 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 GEMIN7Q9H840 131 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 CDC42SE2Q9NRR3 84 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MRPS16Q9Y3D3 137 aaKnown RBP2.46□□□□□ -2.02
SCN3A-206ENST00000465043 ICOSQ9Y6W8 199 aa2.46□□□□□ -2.02
SCN3A-206ENST00000465043 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 TEX48A0A1B0GUV7 120 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 TINCRA0A1B0GVN0 87 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 ZNF815PA8K554 130 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 LEPROTO15243 131 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 CDK2AP2O75956 126 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 IGHV3-30P01768 117 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 IGHV3-33P01772 117 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 IGHV3-30-3P0DP02 117 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 IGHV3-30-5P0DP03 117 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 ZNF25P17030 456 aaPredicted RBP2.45□□□□□ -2.02
SCN3A-206ENST00000465043 HERVK_113P61574 105 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 TMEM97Q5BJF2 176 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00242Q5T6M2 205 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 Q6ZVH6 145 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 Q8NBF4 154 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 CDKN2A-AS1Q9UH64 79 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 TENM3Q9P273 2699 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 MGAM2Q2M2H8 2515 aa2.45□□□□□ -2.02
SCN3A-206ENST00000465043 HUWE1Q7Z6Z7 4374 aaKnown RBP2.44□□□□□ -2.02
SCN3A-206ENST00000465043 IGLV10-54A0A075B6I4 117 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00959A0A1B0GUT2 108 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 A0A1B0GV90 55 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 J3QQQ9 107 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 K7EP13 123 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 DLEU1O43261 78 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 ANGP03950 147 aaKnown RBP2.44□□□□□ -2.02
SCN3A-206ENST00000465043 LGALS3P17931 250 aaKnown RBP2.44□□□□□ -2.02
SCN3A-206ENST00000465043 XCL1P47992 114 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 SMAGPQ0VAQ4 97 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 ESRGQ1W209 222 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 BVES-AS1Q5T3Y7 98 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 LELP1Q5T871 98 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 C5orf38Q86SI9 138 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00269Q8N2A0 174 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 KLK12Q9UKR0 248 aa2.44□□□□□ -2.02
SCN3A-206ENST00000465043 CSDC2Q9Y534 153 aaKnown RBP2.44□□□□□ -2.02
SCN3A-206ENST00000465043 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 IGHV1-58A0A0C4DH39 117 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 A0A0U1RRA0 63 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 IGLL5B9A064 214 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 H3BRM9 83 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 SIVA1O15304 175 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 CCL25O15444 150 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 FXYD2P54710 66 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 HERVK_113P63121 156 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 HSD52Q0P140 79 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 SS18Q15532 418 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 SCGB1D4Q6XE38 83 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 FAM19A3Q7Z5A8 133 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 WFDC10BQ8IUB3 73 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 C10orf126Q8N4M7 172 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 ORAOV1Q8WV07 137 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 ZNF625Q96I27 306 aaPredicted RBP2.43□□□□□ -2.02
SCN3A-206ENST00000465043 HIST1H4GQ99525 98 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 B9D2Q9BPU9 175 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 NAA38Q9BRA0 125 aaKnown RBP2.43□□□□□ -2.02
SCN3A-206ENST00000465043 TOMM7Q9P0U1 55 aa2.43□□□□□ -2.02
SCN3A-206ENST00000465043 A0A0J9YXY3 114 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 H3BNG1 76 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 K7ERJ3 54 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 NPC2P61916 151 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 SEC11AP67812 179 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 REG3AQ06141 175 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 SRSF9Q13242 221 aaKnown RBP eCLIP2.42□□□□□ -2.02
SCN3A-206ENST00000465043 COL5A1-AS1Q5SY13 56 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 ENHOQ6UWT2 76 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 CEND1Q8N111 149 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 CHCHD10Q8WYQ3 142 aaPredicted RBP2.42□□□□□ -2.02
SCN3A-206ENST00000465043 RAB37Q96AX2 223 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 UBE2WQ96B02 151 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 Q9H8V8 135 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 HIGD1BQ9P298 99 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 NDUFA12Q9UI09 145 aa2.42□□□□□ -2.02
SCN3A-206ENST00000465043 DNAH9Q9NYC9 4486 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms