RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.55□□□□□ -2
COL8A1-205ENST00000463753 TRAV22A0A0B4J277 110 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 TRBV7-4A0A0J9YYF1 115 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 KRTAP23-1A1A580 65 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 E7EQL1 145 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 NDUFA1O15239 70 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 CTSGP08311 255 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 RNASE3P12724 160 aaKnown RBP2.55□□□□□ -2
COL8A1-205ENST00000463753 COX7A1P24310 79 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 LINC01547P58512 204 aaPredicted RBP2.55□□□□□ -2
COL8A1-205ENST00000463753 UBE2BP63146 152 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 LINC00337Q8N6G1 96 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 LINC00588Q9Y4M8 146 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 NF1P21359 2839 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 MALRD1Q5VYJ5 2156 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 CHKB-CPT1BH3BT56 60 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 LINC00315P59091 139 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 SYCNQ0VAF6 134 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 DEFB109BQ30KR1 87 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 OBSCN-AS1Q96MR7 158 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 HIGD2AQ9BW72 106 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 DEFB127Q9H1M4 99 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 HECTD1Q9ULT8 2610 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 IGHV4OR15-8A0A075B7B6 117 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 A0A087WW49 117 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 TRBV10-1A0A0K0K1A3 114 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 TRBV10-3A0A0K0K1G6 114 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 CCL24O00175 119 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 UBE2L6O14933 153 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 Q6ZVQ6 151 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 C11orf44Q8N8P7 122 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 PRR26Q8N8Z3 221 aa2.55□□□□□ -2
COL8A1-205ENST00000463753 SPTA1P02549 2419 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 WNK2Q9Y3S1 2297 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 IGHV3-38A0A0C4DH36 116 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 Q6ZTC4 211 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 SND1-IT1Q9HBX3 110 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 RP1L1Q8IWN7 2480 aaPredicted RBP2.54□□□□□ -2
COL8A1-205ENST00000463753 TACC2O95359 2948 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 IGHV1-3A0A0C4DH29 117 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 BPY2O14599 106 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 GYPEP15421 78 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 KIF25-AS1Q9Y6Z4 181 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 DMXL1Q9Y485 3027 aa2.54□□□□□ -2
COL8A1-205ENST00000463753 F8P00451 2351 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 hDV103S1A0JD37 113 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 JMJD7-PLA2G4BH0Y9G9 81 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 H0YGX0 51 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 C19orf84I3L1E1 186 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 M0QY20 66 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 M0R2N4 97 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 IGHV1-8P0DP01 117 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 COX6A2Q02221 97 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 Q0VFX4 171 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 Q1T7F1 81 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 ZFAND2AQ8N6M9 145 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 Q8N9L7 120 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 TTTY12Q9BZ98 90 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 NOTCH2Q04721 2471 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 NDUFS5O43920 106 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 BCE1O60756 84 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 IGKV2D-28P01615 120 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 HTN1P15515 57 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 LINC00158P58513 81 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 KRTAP10-9P60411 292 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 TMEM30BQ3MIR4 351 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 FAM19A3Q7Z5A8 133 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 TOMM7Q9P0U1 55 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 AKAP13Q12802 2813 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 SVEP1Q4LDE5 3571 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 APC2O95996 2303 aa2.53□□□□□ -2
COL8A1-205ENST00000463753 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 HCG22E2RYF7 251 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 IGKV3-20P01619 116 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 CCL17Q92583 94 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 LINC00574Q9H8X3 128 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 ESM1Q9NQ30 184 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 IGLV11-55A0A075B6I3 123 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 TRBV6-5A0A0K0K1A5 114 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 UBE2AP49459 152 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 FAM104AQ969W3 186 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 ATMQ13315 3056 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 INAFM1C9JVW0 142 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 K7EQG2 157 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 IGHV1-46P01743 117 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 PROK1P58294 105 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 CELA1Q9UNI1 258 aa2.52□□□□□ -2.01
COL8A1-205ENST00000463753 FN1P02751 2386 aaKnown RBP2.51□□□□□ -2.01
COL8A1-205ENST00000463753 A6NED7 52 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 CCL4P13236 92 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 SEM1Q6ZVN7 128 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 COX7B2Q8TF08 81 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 LINC00467Q9BRT7 94 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 SPG11Q96JI7 2443 aa2.51□□□□□ -2.01
COL8A1-205ENST00000463753 ROS1P08922 2347 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms