RNA–Protein interactions for RNA: ENST00000463727.1

PTPRE-205, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best)

Gene PTPRE, Length 3,944 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-205ENST00000463727 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
PTPRE-205ENST00000463727 SDIM1Q6ZPB5 146 aa7.35□□□□□ -1.23
PTPRE-205ENST00000463727 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
PTPRE-205ENST00000463727 CHCHD10Q8WYQ3 142 aaPredicted RBP7.35□□□□□ -1.23
PTPRE-205ENST00000463727 A0A1B0GX51 115 aa7.35□□□□□ -1.23
PTPRE-205ENST00000463727 REG3AQ06141 175 aa7.35□□□□□ -1.23
PTPRE-205ENST00000463727 TMEM256-PLSCR3K7ERE1 68 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 A0A087WYN8 130 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 LINC00482Q8N8I6 264 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 SPART-AS1P0CW21 52 aa7.34□□□□□ -1.23
PTPRE-205ENST00000463727 LYRM9A8MSI8 78 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 Q8IZM0 81 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 FAM218AQ96MZ4 157 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 UQCRQO14949 82 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 KIR2DL5BQ8NHK3 375 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 KLK12Q9UKR0 248 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 HAMPP81172 84 aa7.33□□□□□ -1.24
PTPRE-205ENST00000463727 HILS1P60008 231 aa7.32□□□□□ -1.24
PTPRE-205ENST00000463727 FAM19A3Q7Z5A8 133 aa7.32□□□□□ -1.24
PTPRE-205ENST00000463727 DSCR8Q96T75 97 aa7.32□□□□□ -1.24
PTPRE-205ENST00000463727 C16orf95Q9H693 158 aa7.32□□□□□ -1.24
PTPRE-205ENST00000463727 C6orf99Q4VX62 202 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 DEFB121Q5J5C9 76 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 IL17DQ8TAD2 202 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 BAHCC1Q9P281 2608 aa7.31□□□□□ -1.24
PTPRE-205ENST00000463727 FLNAP21333 2647 aaKnown RBP7.3□□□□□ -1.24
PTPRE-205ENST00000463727 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
PTPRE-205ENST00000463727 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
PTPRE-205ENST00000463727 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
PTPRE-205ENST00000463727 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
PTPRE-205ENST00000463727 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
PTPRE-205ENST00000463727 LINC01600Q96MT4 127 aa7.29□□□□□ -1.24
PTPRE-205ENST00000463727 CHD6Q8TD26 2715 aa7.29□□□□□ -1.24
PTPRE-205ENST00000463727 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
PTPRE-205ENST00000463727 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
PTPRE-205ENST00000463727 FBN2P35556 2912 aa7.28□□□□□ -1.24
PTPRE-205ENST00000463727 TEX15Q9BXT5 2789 aa7.28□□□□□ -1.24
PTPRE-205ENST00000463727 LINC00526Q96FQ7 95 aa7.28□□□□□ -1.24
PTPRE-205ENST00000463727 UBR5O95071 2799 aaPredicted RBP7.28□□□□□ -1.24
PTPRE-205ENST00000463727 GIG44P09565 113 aaPredicted RBP7.28□□□□□ -1.24
PTPRE-205ENST00000463727 COX17Q14061 63 aa7.28□□□□□ -1.24
PTPRE-205ENST00000463727 hADV29S1A0JD25 119 aa7.27□□□□□ -1.25
PTPRE-205ENST00000463727 C9orf116Q5BN46 136 aaPredicted RBP7.27□□□□□ -1.25
PTPRE-205ENST00000463727 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
PTPRE-205ENST00000463727 IGHV4-28A0A0C4DH34 117 aa7.27□□□□□ -1.25
PTPRE-205ENST00000463727 KLK5Q9Y337 293 aaPredicted RBP7.27□□□□□ -1.25
PTPRE-205ENST00000463727 COX7CP15954 63 aa7.26□□□□□ -1.25
PTPRE-205ENST00000463727 ZANQ9Y493 2812 aa7.26□□□□□ -1.25
PTPRE-205ENST00000463727 PLAC8L1A1L4L8 177 aa7.26□□□□□ -1.25
PTPRE-205ENST00000463727 Q6JHZ5 121 aa7.26□□□□□ -1.25
PTPRE-205ENST00000463727 Q8N814 137 aa7.26□□□□□ -1.25
PTPRE-205ENST00000463727 CSNK1G2-AS1Q8NCQ2 148 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 ITPR3Q14573 2671 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 MIFP14174 115 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 SMR3AQ99954 134 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 XAGE1AQ9HD64 81 aa7.25□□□□□ -1.25
PTPRE-205ENST00000463727 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
PTPRE-205ENST00000463727 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
PTPRE-205ENST00000463727 CCKP06307 115 aa7.24□□□□□ -1.25
PTPRE-205ENST00000463727 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
PTPRE-205ENST00000463727 A0A087WVE0 104 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 NDUFC2O95298 119 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 CYSRT1A8MQ03 144 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 LELP1Q5T871 98 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 HELZ2Q9BYK8 2649 aaKnown RBP7.23□□□□□ -1.25
PTPRE-205ENST00000463727 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 ENHOQ6UWT2 76 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
PTPRE-205ENST00000463727 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 SERP2Q8N6R1 65 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 C1orf43Q9BWL3 253 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 H3BQ85 93 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 Q6ZQY7 126 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 IGKV2D-24A0A075B6R9 120 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 J3KT08 172 aa7.22□□□□□ -1.25
PTPRE-205ENST00000463727 NKAPP1Q8N9T2 125 aa7.21□□□□□ -1.25
PTPRE-205ENST00000463727 INAFM1C9JVW0 142 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 PDE6GP18545 87 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 UPK3BQ9BT76 320 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 X6R8D5 127 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 COX7BP24311 80 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.26
PTPRE-205ENST00000463727 LY6G6DO95868 133 aa7.2□□□□□ -1.26
PTPRE-205ENST00000463727 CR1P17927 2039 aa7.2□□□□□ -1.26
PTPRE-205ENST00000463727 C6orf223Q8N319 242 aa7.2□□□□□ -1.26
PTPRE-205ENST00000463727 MUC7Q8TAX7 377 aa7.2□□□□□ -1.26
PTPRE-205ENST00000463727 WFDC9Q8NEX5 89 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms