RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 A0A1B0GUT8 65 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 A8MWL6 223 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 SMLR1H3BR10 107 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 HBBP68871 147 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 C3orf22Q8N5N4 141 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 LINC00167Q96N53 147 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 XAGE1AQ9HD64 81 aa4.31□□□□□ -1.72
SMC3-202ENST00000462899 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
SMC3-202ENST00000462899 TRBV24-1A0A075B6N3 115 aa4.3□□□□□ -1.72
SMC3-202ENST00000462899 HIGD1CA8MV81 97 aa4.3□□□□□ -1.72
SMC3-202ENST00000462899 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
SMC3-202ENST00000462899 GATCO43716 136 aaKnown RBP4.3□□□□□ -1.72
SMC3-202ENST00000462899 PPP1R17O96001 155 aa4.3□□□□□ -1.72
SMC3-202ENST00000462899 IGKV2D-26A0A0A0MRZ7 120 aa4.29□□□□□ -1.72
SMC3-202ENST00000462899 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
SMC3-202ENST00000462899 HMSDA8MTL9 139 aa4.29□□□□□ -1.72
SMC3-202ENST00000462899 LINC00337Q8N6G1 96 aa4.29□□□□□ -1.72
SMC3-202ENST00000462899 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
SMC3-202ENST00000462899 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 TCAPO15273 167 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 PNRC1Q12796 327 aaPredicted RBP4.28□□□□□ -1.72
SMC3-202ENST00000462899 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
SMC3-202ENST00000462899 SPAG11AQ6PDA7 123 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 Q8IZM0 81 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 SMIM2Q9BVW6 85 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 PYGO1Q9Y3Y4 419 aa4.28□□□□□ -1.72
SMC3-202ENST00000462899 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.73
SMC3-202ENST00000462899 KANTRA0A1W2PQU2 76 aa4.27□□□□□ -1.73
SMC3-202ENST00000462899 UBE2AP49459 152 aa4.27□□□□□ -1.73
SMC3-202ENST00000462899 FAM104BQ5XKR9 115 aa4.27□□□□□ -1.73
SMC3-202ENST00000462899 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
SMC3-202ENST00000462899 BORCS7Q96B45 105 aa4.27□□□□□ -1.73
SMC3-202ENST00000462899 LINC00862A6NCI5 91 aa4.26□□□□□ -1.73
SMC3-202ENST00000462899 TEX46H3BTG2 121 aa4.26□□□□□ -1.73
SMC3-202ENST00000462899 TAGLN2P37802 199 aaKnown RBP4.26□□□□□ -1.73
SMC3-202ENST00000462899 PRLHP81277 87 aa4.26□□□□□ -1.73
SMC3-202ENST00000462899 PLEKHB2Q96CS7 222 aa4.26□□□□□ -1.73
SMC3-202ENST00000462899 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
SMC3-202ENST00000462899 F8VRH5 84 aa4.25□□□□□ -1.73
SMC3-202ENST00000462899 TMEM250H0YL14 139 aa4.25□□□□□ -1.73
SMC3-202ENST00000462899 Q6ZN92 141 aa4.25□□□□□ -1.73
SMC3-202ENST00000462899 AMELXQ99217 191 aa4.25□□□□□ -1.73
SMC3-202ENST00000462899 IFI27P40305 119 aaPredicted RBP4.24□□□□□ -1.73
SMC3-202ENST00000462899 CKS1BP61024 79 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 RIGQ13278 110 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 LINC01551Q86U37 167 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 EIF5A2Q9GZV4 153 aaKnown RBP4.24□□□□□ -1.73
SMC3-202ENST00000462899 OSTCQ9NRP0 149 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 V9GYV3 84 aa4.24□□□□□ -1.73
SMC3-202ENST00000462899 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 PRYO14603 147 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 SCO1O75880 301 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 NPYP01303 97 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 PRSS2P07478 247 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 C6orf226Q5I0X4 101 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 TOMM7Q9P0U1 55 aa4.23□□□□□ -1.73
SMC3-202ENST00000462899 D6R8Y8 96 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 M0R378 163 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 CXCL5P42830 114 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 Q8N377 158 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 Q8NBF4 154 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
SMC3-202ENST00000462899 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
SMC3-202ENST00000462899 TMEM238C9JI98 176 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 SPINK1P00995 79 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 CKS2P33552 79 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 RPS29P62273 56 aaKnown RBP4.21□□□□□ -1.74
SMC3-202ENST00000462899 FAM74A3Q4VXF1 159 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 C2orf66Q6UXQ4 117 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 DAND5Q8N907 189 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 GNB1LQ9BYB4 327 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
SMC3-202ENST00000462899 A0A1B0GXF2 115 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 PRSS47A8MTI9 375 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 VPREB1P12018 145 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 C2orf88Q9BSF0 95 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 NAT8BQ9UHF3 227 aa4.2□□□□□ -1.74
SMC3-202ENST00000462899 A0A1B0GVG6 124 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 SMIM27A0A1W2PRY6 76 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 HERVK_113P63121 156 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 CBLN2Q8IUK8 224 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 Q8NDZ9 215 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 SMIM7Q9BQ49 75 aa4.19□□□□□ -1.74
SMC3-202ENST00000462899 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
SMC3-202ENST00000462899 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
SMC3-202ENST00000462899 A0A1B0GW15 77 aa4.18□□□□□ -1.74
SMC3-202ENST00000462899 PPBPP02775 128 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms