RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 A0A087WZ39 114 aa10.14□□□□□ -0.79
RPRD1B-203ENST00000462548 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
RPRD1B-203ENST00000462548 LINC01556Q5JQF7 62 aa10.13□□□□□ -0.79
RPRD1B-203ENST00000462548 ZFAND6Q6FIF0 208 aa10.13□□□□□ -0.79
RPRD1B-203ENST00000462548 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
RPRD1B-203ENST00000462548 NHP2Q9NX24 153 aaKnown RBP10.13□□□□□ -0.79
RPRD1B-203ENST00000462548 APLNQ9ULZ1 77 aa10.13□□□□□ -0.79
RPRD1B-203ENST00000462548 APOMO95445 188 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 CCL18P55774 89 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 FOXI1Q12951 378 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
RPRD1B-203ENST00000462548 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
RPRD1B-203ENST00000462548 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
RPRD1B-203ENST00000462548 SCGB1D4Q6XE38 83 aa10.11□□□□□ -0.79
RPRD1B-203ENST00000462548 DNAH1Q9P2D7 4330 aa10.1□□□□□ -0.79
RPRD1B-203ENST00000462548 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
RPRD1B-203ENST00000462548 CRPP02741 224 aa10.09□□□□□ -0.79
RPRD1B-203ENST00000462548 NDUFA1O15239 70 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 LYSTQ99698 3801 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 COX7B2Q8TF08 81 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 Q9H8V8 135 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 TOMM7Q9P0U1 55 aa10.08□□□□□ -0.8
RPRD1B-203ENST00000462548 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
RPRD1B-203ENST00000462548 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
RPRD1B-203ENST00000462548 COX7A2LO14548 114 aa10.07□□□□□ -0.8
RPRD1B-203ENST00000462548 LITAFQ99732 161 aa10.07□□□□□ -0.8
RPRD1B-203ENST00000462548 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
RPRD1B-203ENST00000462548 CCDC179H3BU77 68 aa10.06□□□□□ -0.8
RPRD1B-203ENST00000462548 MIAQ16674 131 aa10.06□□□□□ -0.8
RPRD1B-203ENST00000462548 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
RPRD1B-203ENST00000462548 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
RPRD1B-203ENST00000462548 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
RPRD1B-203ENST00000462548 SMCPP49901 116 aaPredicted RBP10.05□□□□□ -0.8
RPRD1B-203ENST00000462548 CEND1Q8N111 149 aa10.05□□□□□ -0.8
RPRD1B-203ENST00000462548 TAL2Q16559 108 aa10.05□□□□□ -0.8
RPRD1B-203ENST00000462548 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
RPRD1B-203ENST00000462548 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
RPRD1B-203ENST00000462548 TENM2Q9NT68 2774 aa10.03□□□□□ -0.8
RPRD1B-203ENST00000462548 KIAA0087Q14695 138 aa10.03□□□□□ -0.8
RPRD1B-203ENST00000462548 MALP21145 153 aa10.03□□□□□ -0.8
RPRD1B-203ENST00000462548 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPRD1B-203ENST00000462548 Q9HAA7 133 aa10.03□□□□□ -0.8
RPRD1B-203ENST00000462548 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
RPRD1B-203ENST00000462548 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
RPRD1B-203ENST00000462548 Q8IZM0 81 aa10.02□□□□□ -0.81
RPRD1B-203ENST00000462548 CARD19Q96LW7 228 aa10.02□□□□□ -0.81
RPRD1B-203ENST00000462548 C2orf82Q6UX34 121 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 UBE2DNLQ8IWF7 75 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 DAND5Q8N907 189 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 KRTAP1-5Q9BYS1 174 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 PPDPFQ9H3Y8 114 aa10.01□□□□□ -0.81
RPRD1B-203ENST00000462548 TGP01266 2768 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 IGKV2D-24A0A075B6R9 120 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 M0QXV9 152 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 C6orf226Q5I0X4 101 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 C1orf43Q9BWL3 253 aa10□□□□□ -0.81
RPRD1B-203ENST00000462548 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
RPRD1B-203ENST00000462548 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
RPRD1B-203ENST00000462548 TIMM17BO60830 172 aa9.99□□□□□ -0.81
RPRD1B-203ENST00000462548 PRSS2P07478 247 aa9.99□□□□□ -0.81
RPRD1B-203ENST00000462548 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
RPRD1B-203ENST00000462548 MUSTN1Q8IVN3 82 aa9.98□□□□□ -0.81
RPRD1B-203ENST00000462548 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
RPRD1B-203ENST00000462548 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
RPRD1B-203ENST00000462548 NPC2P61916 151 aa9.97□□□□□ -0.81
RPRD1B-203ENST00000462548 SPAG11BQ08648 103 aa9.97□□□□□ -0.81
RPRD1B-203ENST00000462548 MEIG1Q5JSS6 88 aa9.97□□□□□ -0.81
RPRD1B-203ENST00000462548 PPDPFLQ8WWR9 84 aa9.97□□□□□ -0.81
RPRD1B-203ENST00000462548 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
RPRD1B-203ENST00000462548 C15orf56Q8N910 161 aa9.96□□□□□ -0.81
RPRD1B-203ENST00000462548 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
RPRD1B-203ENST00000462548 DNAH10Q8IVF4 4471 aa9.95□□□□□ -0.82
RPRD1B-203ENST00000462548 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
RPRD1B-203ENST00000462548 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
RPRD1B-203ENST00000462548 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 A4D1N5 150 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
RPRD1B-203ENST00000462548 PFN2P35080 140 aa9.93□□□□□ -0.82
RPRD1B-203ENST00000462548 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
RPRD1B-203ENST00000462548 LINC00308Q8TCZ7 52 aa9.93□□□□□ -0.82
RPRD1B-203ENST00000462548 NTN5Q8WTR8 489 aaPredicted RBP9.93□□□□□ -0.82
RPRD1B-203ENST00000462548 IFITM1P13164 125 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 CXCL5P42830 114 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 PSMB2P49721 201 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 MIR7-3HGQ8N6C7 128 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 LINC00158P58513 81 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
RPRD1B-203ENST00000462548 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms