RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
APP-211ENST00000462267 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
APP-211ENST00000462267 GAGE10A6NGK3 116 aa8.54□□□□□ -1.04
APP-211ENST00000462267 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
APP-211ENST00000462267 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
APP-211ENST00000462267 PNRC1Q12796 327 aaPredicted RBP8.53□□□□□ -1.04
APP-211ENST00000462267 RIGQ13278 110 aa8.53□□□□□ -1.04
APP-211ENST00000462267 Q6ZN92 141 aa8.53□□□□□ -1.04
APP-211ENST00000462267 Q8IZM0 81 aa8.53□□□□□ -1.04
APP-211ENST00000462267 LINC00862A6NCI5 91 aa8.52□□□□□ -1.05
APP-211ENST00000462267 IFI27P40305 119 aaPredicted RBP8.52□□□□□ -1.05
APP-211ENST00000462267 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
APP-211ENST00000462267 F8VRH5 84 aa8.51□□□□□ -1.05
APP-211ENST00000462267 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
APP-211ENST00000462267 DAND5Q8N907 189 aa8.51□□□□□ -1.05
APP-211ENST00000462267 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
APP-211ENST00000462267 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
APP-211ENST00000462267 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
APP-211ENST00000462267 PRLHP81277 87 aa8.5□□□□□ -1.05
APP-211ENST00000462267 XP32Q5T750 250 aa8.5□□□□□ -1.05
APP-211ENST00000462267 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
APP-211ENST00000462267 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
APP-211ENST00000462267 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
APP-211ENST00000462267 IGLV4-3A0A075B6K6 122 aa8.49□□□□□ -1.05
APP-211ENST00000462267 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
APP-211ENST00000462267 CKS2P33552 79 aa8.48□□□□□ -1.05
APP-211ENST00000462267 TEX43Q6ZNM6 134 aa8.48□□□□□ -1.05
APP-211ENST00000462267 NDUFA12Q9UI09 145 aa8.48□□□□□ -1.05
APP-211ENST00000462267 FAM19A1Q7Z5A9 133 aa8.47□□□□□ -1.05
APP-211ENST00000462267 C2orf88Q9BSF0 95 aa8.47□□□□□ -1.05
APP-211ENST00000462267 EIF5A2Q9GZV4 153 aaKnown RBP8.47□□□□□ -1.05
APP-211ENST00000462267 IGKV2-28A0A075B6P5 120 aa8.46□□□□□ -1.06
APP-211ENST00000462267 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
APP-211ENST00000462267 SPINK1P00995 79 aa8.46□□□□□ -1.06
APP-211ENST00000462267 IGKV2D-28P01615 120 aa8.46□□□□□ -1.06
APP-211ENST00000462267 GNB1LQ9BYB4 327 aa8.46□□□□□ -1.06
APP-211ENST00000462267 CXCL5P42830 114 aa8.45□□□□□ -1.06
APP-211ENST00000462267 OSTCQ9NRP0 149 aa8.45□□□□□ -1.06
APP-211ENST00000462267 RAB5AP20339 215 aa8.44□□□□□ -1.06
APP-211ENST00000462267 RAB14P61106 215 aa8.44□□□□□ -1.06
APP-211ENST00000462267 Q8NBF4 154 aa8.44□□□□□ -1.06
APP-211ENST00000462267 TMEM126AQ9H061 195 aa8.44□□□□□ -1.06
APP-211ENST00000462267 CBLN2Q8IUK8 224 aa8.43□□□□□ -1.06
APP-211ENST00000462267 M0R2T5 61 aa8.42□□□□□ -1.06
APP-211ENST00000462267 CEBPGP53567 150 aa8.42□□□□□ -1.06
APP-211ENST00000462267 S100A12P80511 92 aa8.42□□□□□ -1.06
APP-211ENST00000462267 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
APP-211ENST00000462267 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
APP-211ENST00000462267 TMEM238C9JI98 176 aa8.41□□□□□ -1.06
APP-211ENST00000462267 D6R8Y8 96 aa8.41□□□□□ -1.06
APP-211ENST00000462267 SCO1O75880 301 aa8.41□□□□□ -1.06
APP-211ENST00000462267 NPYP01303 97 aa8.41□□□□□ -1.06
APP-211ENST00000462267 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
APP-211ENST00000462267 IFITM2Q01629 132 aa8.41□□□□□ -1.06
APP-211ENST00000462267 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
APP-211ENST00000462267 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
APP-211ENST00000462267 AMELXQ99217 191 aa8.41□□□□□ -1.06
APP-211ENST00000462267 VCX2Q9H322 139 aa8.41□□□□□ -1.06
APP-211ENST00000462267 NAT8BQ9UHF3 227 aa8.41□□□□□ -1.06
APP-211ENST00000462267 PEA15Q15121 130 aa8.4□□□□□ -1.06
APP-211ENST00000462267 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
APP-211ENST00000462267 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
APP-211ENST00000462267 V9GYV3 84 aa8.4□□□□□ -1.06
APP-211ENST00000462267 A0A1B0GW15 77 aa8.39□□□□□ -1.07
APP-211ENST00000462267 M0R378 163 aa8.39□□□□□ -1.07
APP-211ENST00000462267 HERVK_113P63121 156 aa8.39□□□□□ -1.07
APP-211ENST00000462267 SEC11AP67812 179 aa8.39□□□□□ -1.07
APP-211ENST00000462267 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
APP-211ENST00000462267 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
APP-211ENST00000462267 HIGD2AQ9BW72 106 aa8.39□□□□□ -1.07
APP-211ENST00000462267 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
APP-211ENST00000462267 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
APP-211ENST00000462267 PPBPP02775 128 aa8.38□□□□□ -1.07
APP-211ENST00000462267 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
APP-211ENST00000462267 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
APP-211ENST00000462267 NPSP0C0P6 89 aa8.37□□□□□ -1.07
APP-211ENST00000462267 FAM74A3Q4VXF1 159 aa8.37□□□□□ -1.07
APP-211ENST00000462267 Q8N377 158 aa8.37□□□□□ -1.07
APP-211ENST00000462267 RAB5BP61020 215 aa8.36□□□□□ -1.07
APP-211ENST00000462267 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
APP-211ENST00000462267 CYSLTR1Q9Y271 337 aa8.36□□□□□ -1.07
APP-211ENST00000462267 C9JQL5 133 aa8.35□□□□□ -1.07
APP-211ENST00000462267 F8W036 122 aa8.35□□□□□ -1.07
APP-211ENST00000462267 SLC25A20O43772 301 aa8.35□□□□□ -1.07
APP-211ENST00000462267 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
APP-211ENST00000462267 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
APP-211ENST00000462267 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
APP-211ENST00000462267 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
APP-211ENST00000462267 S100A8P05109 93 aa8.33□□□□□ -1.08
APP-211ENST00000462267 VPREB1P12018 145 aa8.33□□□□□ -1.08
APP-211ENST00000462267 SMIM27A0A1W2PRY6 76 aa8.32□□□□□ -1.08
APP-211ENST00000462267 SMIM1B2RUZ4 78 aa8.32□□□□□ -1.08
APP-211ENST00000462267 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
APP-211ENST00000462267 ORMDL3Q8N138 153 aa8.32□□□□□ -1.08
APP-211ENST00000462267 USH2AO75445 5202 aa8.31□□□□□ -1.08
APP-211ENST00000462267 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
APP-211ENST00000462267 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
APP-211ENST00000462267 RPL24P83731 157 aaKnown RBP8.31□□□□□ -1.08
APP-211ENST00000462267 ADIRFQ15847 76 aa8.31□□□□□ -1.08
APP-211ENST00000462267 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms