RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 HIST3H2BBQ8N257 126 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 ATP6V0E2Q8NHE4 81 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 CHCHD1Q96BP2 118 aaKnown RBP3.1□□□□□ -1.91
CSMD3-205ENST00000462254 CHCHD7Q9BUK0 85 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 DAZ3Q9NR90 486 aaKnown RBP3.1□□□□□ -1.91
CSMD3-205ENST00000462254 ICOSQ9Y6W8 199 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 STAB2Q8WWQ8 2551 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV6-8A0A0A6YYG3 113 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 IGKV2-29A2NJV5 120 aaPredicted RBP3.09□□□□□ -1.91
CSMD3-205ENST00000462254 IGLL5B9A064 214 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 K7EMI3 77 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 FCER1GP30273 86 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 CXCL5P42830 114 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 NMUP48645 174 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 RPL39P62891 51 aaKnown RBP3.09□□□□□ -1.91
CSMD3-205ENST00000462254 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 Q6ZRU5 148 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 C15orf53Q8NAA6 179 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 ANAPC13Q9BS18 74 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 GTSF1LQ9H1H1 148 aa3.09□□□□□ -1.91
CSMD3-205ENST00000462254 CSMD3Q7Z407 3707 aa3.09□□□□□ -1.92
CSMD3-205ENST00000462254 DNAH7Q8WXX0 4024 aa3.09□□□□□ -1.92
CSMD3-205ENST00000462254 STARD9Q9P2P6 4700 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 TGP01266 2768 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 TRBV25-1A0A075B6N4 114 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 HBDP02042 147 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 FABP4P15090 132 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 MP68P56378 58 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 ESRGQ1W209 222 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 LYPD5Q6UWN5 251 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 CEND1Q8N111 149 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 TOMM6Q96B49 74 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 HIST1H2BLQ99880 126 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 APLNQ9ULZ1 77 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 UBE2D4Q9Y2X8 147 aa3.08□□□□□ -1.92
CSMD3-205ENST00000462254 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
CSMD3-205ENST00000462254 NUPR2A6NF83 97 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 LEPROTL1O95214 131 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 SCGB1C2P0DMR2 95 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 HIGD2BQ4VC39 106 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 MPV17L2Q567V2 206 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 LELP1Q5T871 98 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 ZFAND6Q6FIF0 208 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 Q6ZUT4 128 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 SH2D6Q7Z4S9 175 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 FAM19A3Q7Z5A8 133 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 SPATA12Q7Z6I5 190 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 MUC7Q8TAX7 377 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 CYSLTR1Q9Y271 337 aa3.07□□□□□ -1.92
CSMD3-205ENST00000462254 IGLV4-60A0A075B6I1 120 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 IGIPA6NJ69 53 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 C3orf79P0CE67 100 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 FGF6P10767 208 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 UBE2AP49459 152 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 JOSD1Q15040 202 aaPredicted RBP3.06□□□□□ -1.92
CSMD3-205ENST00000462254 RNASE13Q5GAN3 156 aaKnown RBP3.06□□□□□ -1.92
CSMD3-205ENST00000462254 OR10D4PQ8NGN7 298 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 IFI27L1Q96BM0 104 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 SCGB3A1Q96QR1 104 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 TIMM21Q9BVV7 248 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 LINC00588Q9Y4M8 146 aa3.06□□□□□ -1.92
CSMD3-205ENST00000462254 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 LINC01549A6NIU2 74 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 M0R143 59 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 UBE2L6O14933 153 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 ZNF25P17030 456 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-205ENST00000462254 TCTAP57738 103 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 RBX1P62877 108 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 SMIM20Q8N5G0 67 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 Q8N976 141 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 C14orf144Q96I85 54 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 AMELXQ99217 191 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 SPANXA1Q9NS26 97 aa3.05□□□□□ -1.92
CSMD3-205ENST00000462254 KLK5Q9Y337 293 aaPredicted RBP3.05□□□□□ -1.92
CSMD3-205ENST00000462254 MRPS16Q9Y3D3 137 aaKnown RBP3.05□□□□□ -1.92
CSMD3-205ENST00000462254 PLECQ15149 4684 aaKnown RBP3.04□□□□□ -1.92
CSMD3-205ENST00000462254 KRTAP16-1A8MUX0 517 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-205ENST00000462254 SYS1-DBNDD2H3BUS1 97 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 IGHV3-30P01768 117 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 IGHV3-33P01772 117 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 IGHV3-30-3P0DP02 117 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 IGHV3-30-5P0DP03 117 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 CCL18P55774 89 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-205ENST00000462254 KRTDAPP60985 99 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 MRPS36P82909 103 aaKnown RBP3.04□□□□□ -1.92
CSMD3-205ENST00000462254 AMMECR1LQ6DCA0 310 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 CLPSL2Q6UWE3 100 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 ZNF664Q8N3J9 261 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 OR5A1Q8NGJ0 315 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 OR13C6PQ8NH95 151 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 TMEM141Q96I45 108 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 UPK3BQ9BT76 320 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
CSMD3-205ENST00000462254 HSPB8Q9UJY1 196 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms