RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 PPP1R2P41236 205 aa-0.22□□□□□ -2.44
CALD1-213ENST00000462181 XAF1Q6GPH4 301 aa-0.22□□□□□ -2.44
CALD1-213ENST00000462181 C3orf33Q6P1S2 294 aa-0.22□□□□□ -2.44
CALD1-213ENST00000462181 OR2H1Q9GZK4 316 aa-0.22□□□□□ -2.44
CALD1-213ENST00000462181 GLYATL3Q5SZD4 288 aa-0.23□□□□□ -2.45
CALD1-213ENST00000462181 NEK7Q8TDX7 302 aa-0.23□□□□□ -2.45
CALD1-213ENST00000462181 AP1S3Q96PC3 154 aa-0.23□□□□□ -2.45
CALD1-213ENST00000462181 LOC107984156A0A0G2JMH3 177 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 TMEM210A6NLX4 147 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 H3BUA1 57 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 PIAS1O75925 651 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 PIPP12273 146 aaPredicted RBP-0.24□□□□□ -2.45
CALD1-213ENST00000462181 DHRS4L2Q6PKH6 230 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 HRCT1Q6UXD1 115 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 ARL17AQ8IVW1 177 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 TTC9CQ8N5M4 171 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 FAM24BQ8N5W8 94 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 USMG5Q96IX5 58 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 V9GYQ6 96 aa-0.24□□□□□ -2.45
CALD1-213ENST00000462181 UBE2D2P62837 147 aa-0.25□□□□□ -2.45
CALD1-213ENST00000462181 MRPS15P82914 257 aaKnown RBP-0.25□□□□□ -2.45
CALD1-213ENST00000462181 OR2T2Q6IF00 324 aa-0.25□□□□□ -2.45
CALD1-213ENST00000462181 CROCCP2Q86T23 111 aa-0.25□□□□□ -2.45
CALD1-213ENST00000462181 RTL8AQ9BWD3 113 aa-0.25□□□□□ -2.45
CALD1-213ENST00000462181 SS18L2Q9UHA2 77 aa-0.25□□□□□ -2.45
CALD1-213ENST00000462181 FABP4P15090 132 aa-0.26□□□□□ -2.45
CALD1-213ENST00000462181 MNS1Q8NEH6 495 aa-0.26□□□□□ -2.45
CALD1-213ENST00000462181 NUP35Q8NFH5 326 aa-0.26□□□□□ -2.45
CALD1-213ENST00000462181 NOP10Q9NPE3 64 aaKnown RBP-0.26□□□□□ -2.45
CALD1-213ENST00000462181 UFC1Q9Y3C8 167 aa-0.26□□□□□ -2.45
CALD1-213ENST00000462181 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.26□□□□□ -2.45
CALD1-213ENST00000462181 MRPS36P82909 103 aaKnown RBP-0.27□□□□□ -2.45
CALD1-213ENST00000462181 KLKP1Q107X0 134 aa-0.27□□□□□ -2.45
CALD1-213ENST00000462181 HACD4Q5VWC8 232 aa-0.27□□□□□ -2.45
CALD1-213ENST00000462181 OR13C6PQ8NH95 151 aa-0.27□□□□□ -2.45
CALD1-213ENST00000462181 GINS3Q9BRX5 216 aa-0.27□□□□□ -2.45
CALD1-213ENST00000462181 TRAPPC2LQ9UL33 140 aa-0.27□□□□□ -2.45
CALD1-213ENST00000462181 YPEL1O60688 119 aa-0.28□□□□□ -2.45
CALD1-213ENST00000462181 GYPBP06028 91 aa-0.28□□□□□ -2.45
CALD1-213ENST00000462181 SNRPD3P62318 126 aaKnown RBP-0.28□□□□□ -2.45
CALD1-213ENST00000462181 PSPHP78330 225 aa-0.28□□□□□ -2.45
CALD1-213ENST00000462181 OR5AK2Q8NH90 309 aa-0.28□□□□□ -2.45
CALD1-213ENST00000462181 C3orf85A0A1B0GTC6 90 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 IQCF6A8MYZ5 107 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 IFNA1P01562 189 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 S100A6P06703 90 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 CRYBA4P53673 196 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 C9orf116Q5BN46 136 aaPredicted RBP-0.29□□□□□ -2.46
CALD1-213ENST00000462181 SKA2Q8WVK7 121 aaPredicted RBP-0.29□□□□□ -2.46
CALD1-213ENST00000462181 PLEKHB2Q96CS7 222 aa-0.29□□□□□ -2.46
CALD1-213ENST00000462181 CSN2P05814 226 aa-0.3□□□□□ -2.46
CALD1-213ENST00000462181 ZNF720Q7Z2F6 126 aa-0.3□□□□□ -2.46
CALD1-213ENST00000462181 LINC00208Q96KT6 92 aa-0.3□□□□□ -2.46
CALD1-213ENST00000462181 PRO0255Q9UI72 69 aa-0.3□□□□□ -2.46
CALD1-213ENST00000462181 A0A0D9SFI3 127 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 C5orf58C9J3I9 102 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 H3BQV1 296 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 KPNA4O00629 521 aaPredicted RBP-0.31□□□□□ -2.46
CALD1-213ENST00000462181 BCL2P10415 239 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 POU6F1Q14863 301 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 ZNF56Q15929 161 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 CHMP6Q96FZ7 201 aa-0.31□□□□□ -2.46
CALD1-213ENST00000462181 TRAV2A0A0B4J234 112 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 FAM223BA6NKX1 122 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 CCL22O00626 93 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 TRACP01848 142 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 IZUMO2Q6UXV1 221 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 FAM223AQ8IWN6 122 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 COA4Q9NYJ1 87 aa-0.32□□□□□ -2.46
CALD1-213ENST00000462181 MFSD11O43934 449 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 EDDM3BP56851 147 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 Q0VG73 95 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 FXYD3Q14802 87 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.33□□□□□ -2.46
CALD1-213ENST00000462181 BORCS8Q96FH0 119 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 CIB3Q96Q77 187 aaPredicted RBP-0.33□□□□□ -2.46
CALD1-213ENST00000462181 SLC35B3Q9H1N7 401 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 RABAC1Q9UI14 185 aa-0.33□□□□□ -2.46
CALD1-213ENST00000462181 BBIP1A8MTZ0 92 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 RPL22P35268 128 aaKnown RBP-0.34□□□□□ -2.46
CALD1-213ENST00000462181 ETV6P41212 452 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 NDUFA6P56556 154 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 CSAG1Q6PB30 78 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 RHPN1-AS1Q9BWJ2 59 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 PCBD2Q9H0N5 130 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 TAF9BQ9HBM6 251 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 OTORQ9NRC9 128 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 MRPL35Q9NZE8 188 aaKnown RBP-0.34□□□□□ -2.46
CALD1-213ENST00000462181 LAMTOR3Q9UHA4 124 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 SMPXQ9UHP9 88 aa-0.34□□□□□ -2.46
CALD1-213ENST00000462181 NOP16Q9Y3C1 178 aaKnown RBP-0.34□□□□□ -2.46
CALD1-213ENST00000462181 E2F6O75461 281 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 HLA-DRB4P13762 266 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 LTC4SQ16873 150 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 PSMG4Q5JS54 123 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 CLEC2BQ92478 149 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 CARD19Q96LW7 228 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 CRIPTQ9P021 101 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 LINC00312Q9Y6C7 94 aa-0.35□□□□□ -2.47
CALD1-213ENST00000462181 HLA-DRB4X5D2U9 266 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms