RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CEBPZOSA8MTT3 80 aa0.97□□□□□ -2.25
SPTLC1-203ENST00000461132 KNDC1Q76NI1 1749 aa0.97□□□□□ -2.25
SPTLC1-203ENST00000461132 KIF14Q15058 1648 aa0.97□□□□□ -2.25
SPTLC1-203ENST00000461132 SETBP1Q9Y6X0 1596 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 A0A1B0GUT8 65 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 PLAC8Q9NZF1 115 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 UBE2D4Q9Y2X8 147 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 CCDC141Q6ZP82 1450 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 MAP3K4Q9Y6R4 1608 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 DNAJC13O75165 2243 aa0.96□□□□□ -2.26
SPTLC1-203ENST00000461132 IGLC3P0DOY3 106 aa0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 Q8IZM0 81 aa0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 USMG5Q96IX5 58 aa0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 RRBP1Q9P2E9 1410 aaKnown RBP0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 A0A0G2JMZ2 1700 aa0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 XRN1Q8IZH2 1706 aaKnown RBP0.95□□□□□ -2.26
SPTLC1-203ENST00000461132 NEXMIFQ5QGS0 1516 aa0.94□□□□□ -2.26
SPTLC1-203ENST00000461132 KCPQ6ZWJ8 1503 aa0.94□□□□□ -2.26
SPTLC1-203ENST00000461132 FXYD6-FXYD2A0A087WZ82 144 aa0.94□□□□□ -2.26
SPTLC1-203ENST00000461132 SHPRHQ149N8 1683 aa0.94□□□□□ -2.26
SPTLC1-203ENST00000461132 GOLGA4Q13439 2230 aaKnown RBP0.93□□□□□ -2.26
SPTLC1-203ENST00000461132 ERVK-7P63135 1459 aa0.93□□□□□ -2.26
SPTLC1-203ENST00000461132 LINC00959A0A1B0GUT2 108 aa0.93□□□□□ -2.26
SPTLC1-203ENST00000461132 IGLC2P0DOY2 106 aa0.93□□□□□ -2.26
SPTLC1-203ENST00000461132 PRB3Q04118 309 aaPredicted RBP0.93□□□□□ -2.26
SPTLC1-203ENST00000461132 LRRC9Q6ZRR7 1453 aa0.92□□□□□ -2.26
SPTLC1-203ENST00000461132 H3BUT2 72 aa0.92□□□□□ -2.26
SPTLC1-203ENST00000461132 NDUFB1O75438 58 aa0.92□□□□□ -2.26
SPTLC1-203ENST00000461132 DEFB112Q30KQ8 113 aa0.92□□□□□ -2.26
SPTLC1-203ENST00000461132 CRYBG1Q9Y4K1 1723 aa0.92□□□□□ -2.26
SPTLC1-203ENST00000461132 C5P01031 1676 aa0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 DCAF1Q9Y4B6 1507 aa0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 CFDP00746 253 aaPredicted RBP0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 COX8AP10176 69 aa0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 CRIPTQ9P021 101 aa0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 FAM208BQ5VWN6 2430 aa0.91□□□□□ -2.26
SPTLC1-203ENST00000461132 TARBP1Q13395 1621 aaKnown RBP0.9□□□□□ -2.26
SPTLC1-203ENST00000461132 I3L2K1 104 aa0.9□□□□□ -2.27
SPTLC1-203ENST00000461132 BVES-AS1Q5T3Y7 98 aa0.9□□□□□ -2.27
SPTLC1-203ENST00000461132 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
SPTLC1-203ENST00000461132 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
SPTLC1-203ENST00000461132 SAMD9Q5K651 1589 aa0.9□□□□□ -2.27
SPTLC1-203ENST00000461132 ABCC1P33527 1531 aa0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 ZNF462Q96JM2 2506 aa0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 RPL38P63173 70 aaKnown RBP0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 ATP5EP2Q5VTU8 51 aa0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 ASH1LQ9NR48 2969 aaKnown RBP0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 TULP4Q9NRJ4 1543 aa0.89□□□□□ -2.27
SPTLC1-203ENST00000461132 ATP7BP35670 1465 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 SPTY2D1-AS1A0A0U1RR47 76 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 COX6B1P14854 86 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 GAFA1Q96PS6 74 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 UBR1Q8IWV7 1749 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 PAPPAQ13219 1627 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 KDM5DQ9BY66 1539 aa0.88□□□□□ -2.27
SPTLC1-203ENST00000461132 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
SPTLC1-203ENST00000461132 KIAA0556O60303 1618 aa0.87□□□□□ -2.27
SPTLC1-203ENST00000461132 A0A087WXM4 84 aa0.87□□□□□ -2.27
SPTLC1-203ENST00000461132 I3L3M4 83 aa0.87□□□□□ -2.27
SPTLC1-203ENST00000461132 ANKARQ7Z5J8 1434 aa0.87□□□□□ -2.27
SPTLC1-203ENST00000461132 LAMC1P11047 1609 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 PAPPA2Q9BXP8 1791 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 SMIM13P0DJ93 91 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 WFDC9Q8NEX5 89 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 C18orf32Q8TCD1 76 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 LRRC37AA6NMS7 1700 aa0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 NKTRP30414 1462 aaKnown RBP0.86□□□□□ -2.27
SPTLC1-203ENST00000461132 ANKRD36A6QL64 1941 aa0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 URB2Q14146 1524 aaKnown RBP0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 KIF20BQ96Q89 1820 aa0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 DEFB121Q5J5C9 76 aa0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 PKD1L3Q7Z443 1732 aa0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 SMCO4Q9NRQ5 59 aa0.85□□□□□ -2.27
SPTLC1-203ENST00000461132 TRAV21A0A0B4J279 112 aa0.84□□□□□ -2.27
SPTLC1-203ENST00000461132 K7EQZ3 153 aa0.84□□□□□ -2.27
SPTLC1-203ENST00000461132 PDCD5O14737 125 aa0.84□□□□□ -2.27
SPTLC1-203ENST00000461132 COX7BP24311 80 aa0.84□□□□□ -2.27
SPTLC1-203ENST00000461132 ALKQ9UM73 1620 aa0.84□□□□□ -2.28
SPTLC1-203ENST00000461132 CACNA1HO95180 2353 aa0.84□□□□□ -2.28
SPTLC1-203ENST00000461132 UBR3Q6ZT12 1888 aa0.84□□□□□ -2.28
SPTLC1-203ENST00000461132 PLCE1Q9P212 2302 aa0.83□□□□□ -2.28
SPTLC1-203ENST00000461132 UMAD1C9J7I0 102 aa0.83□□□□□ -2.28
SPTLC1-203ENST00000461132 Q5BKY6 102 aa0.83□□□□□ -2.28
SPTLC1-203ENST00000461132 Q5VSD8 79 aa0.83□□□□□ -2.28
SPTLC1-203ENST00000461132 DIP2BQ9P265 1576 aa0.83□□□□□ -2.28
SPTLC1-203ENST00000461132 NHSL1Q5SYE7 1610 aa0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 BIVM-ERCC5R4GMW8 1640 aa0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 SPINK1P00995 79 aa0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 HMGA1P17096 107 aaKnown RBP0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 IFI27P40305 119 aaPredicted RBP0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 DOPEY2Q9Y3R5 2298 aa0.82□□□□□ -2.28
SPTLC1-203ENST00000461132 URB1O60287 2271 aaKnown RBP0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 LRRC7Q96NW7 1537 aa0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 CPSF4LA6NMK7 179 aaKnown RBP0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 CCL22O00626 93 aa0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 CFAP74Q9C0B2 1584 aa0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 CLIP1P30622 1438 aa0.81□□□□□ -2.28
SPTLC1-203ENST00000461132 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms