RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 MUSTN1Q8IVN3 82 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 RAB37Q96AX2 223 aa7.52□□□□□ -1.21
NEDD9-206ENST00000461055 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 IGLL5B9A064 214 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 H3BUT2 72 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 K7EP13 123 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 MALP21145 153 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 ESRGQ1W209 222 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 MUC7Q8TAX7 377 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 PRO1854Q9UHT4 67 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 KLK5Q9Y337 293 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-206ENST00000461055 HYDINQ4G0P3 5121 aa7.51□□□□□ -1.21
NEDD9-206ENST00000461055 STARD9Q9P2P6 4700 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 A4D1N5 150 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 GAGE10A6NGK3 116 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 CFC1P0CG37 223 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 TOMM7Q9P0U1 55 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
NEDD9-206ENST00000461055 CCL18P55774 89 aa7.49□□□□□ -1.21
NEDD9-206ENST00000461055 FOXI1Q12951 378 aa7.49□□□□□ -1.21
NEDD9-206ENST00000461055 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
NEDD9-206ENST00000461055 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
NEDD9-206ENST00000461055 K7ERJ3 54 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 DNAH10OSP0CZ25 163 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 CKS1BP61024 79 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 COX17Q14061 63 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 ERG28Q9UKR5 140 aa7.48□□□□□ -1.21
NEDD9-206ENST00000461055 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 F8WDY8 70 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 K7EP34 96 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 CLPSL2Q6UWE3 100 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 PLECQ15149 4684 aaKnown RBP7.47□□□□□ -1.21
NEDD9-206ENST00000461055 LYSTQ99698 3801 aa7.47□□□□□ -1.21
NEDD9-206ENST00000461055 TRBV20-1A0A075B6N2 111 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 WFDC10BQ8IUB3 73 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 UBE2WQ96B02 151 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 UPK3BQ9BT76 320 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 SPCS1Q9Y6A9 102 aa7.46□□□□□ -1.22
NEDD9-206ENST00000461055 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
NEDD9-206ENST00000461055 LINC00158P58513 81 aa7.45□□□□□ -1.22
NEDD9-206ENST00000461055 KIAA0087Q14695 138 aa7.45□□□□□ -1.22
NEDD9-206ENST00000461055 IGLV10-54A0A075B6I4 117 aa7.44□□□□□ -1.22
NEDD9-206ENST00000461055 TSPAN13O95857 204 aa7.44□□□□□ -1.22
NEDD9-206ENST00000461055 RMI2Q96E14 147 aa7.44□□□□□ -1.22
NEDD9-206ENST00000461055 GVQW2A0A096LPI5 108 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-206ENST00000461055 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
NEDD9-206ENST00000461055 COX6CP09669 75 aa7.43□□□□□ -1.22
NEDD9-206ENST00000461055 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
NEDD9-206ENST00000461055 Q8N3U1 123 aa7.43□□□□□ -1.22
NEDD9-206ENST00000461055 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
NEDD9-206ENST00000461055 TRAV13-2A0A0B4J235 113 aa7.42□□□□□ -1.22
NEDD9-206ENST00000461055 TRBV30A0A0K0K1B3 111 aa7.42□□□□□ -1.22
NEDD9-206ENST00000461055 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
NEDD9-206ENST00000461055 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
NEDD9-206ENST00000461055 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
NEDD9-206ENST00000461055 PSMB2P49721 201 aa7.41□□□□□ -1.22
NEDD9-206ENST00000461055 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
NEDD9-206ENST00000461055 A0A0U1RRA0 63 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 F8W1H4 67 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 Q1RN00 199 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 DAND5Q8N907 189 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 NTN5Q8WTR8 489 aaPredicted RBP7.4□□□□□ -1.22
NEDD9-206ENST00000461055 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
NEDD9-206ENST00000461055 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
NEDD9-206ENST00000461055 LCE6AA0A183 80 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 PFN2P35080 140 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 NPC2P61916 151 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
NEDD9-206ENST00000461055 NDUFC2O95298 119 aa7.38□□□□□ -1.23
NEDD9-206ENST00000461055 IGKV2D-24A0A075B6R9 120 aa7.37□□□□□ -1.23
NEDD9-206ENST00000461055 EIF4EBP3O60516 100 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-206ENST00000461055 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
NEDD9-206ENST00000461055 ATXN8Q156A1 80 aa7.37□□□□□ -1.23
NEDD9-206ENST00000461055 C2orf82Q6UX34 121 aa7.37□□□□□ -1.23
NEDD9-206ENST00000461055 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
NEDD9-206ENST00000461055 H7C2G1 150 aa7.35□□□□□ -1.23
NEDD9-206ENST00000461055 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
NEDD9-206ENST00000461055 H3BMG7 143 aa7.34□□□□□ -1.23
NEDD9-206ENST00000461055 M0QXV9 152 aa7.34□□□□□ -1.23
NEDD9-206ENST00000461055 RNF151Q2KHN1 245 aa7.34□□□□□ -1.23
NEDD9-206ENST00000461055 CAMK2N2Q96S95 79 aa7.34□□□□□ -1.23
NEDD9-206ENST00000461055 TRIAP1O43715 76 aa7.33□□□□□ -1.24
NEDD9-206ENST00000461055 RPL28P46779 137 aaKnown RBP7.33□□□□□ -1.24
NEDD9-206ENST00000461055 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
NEDD9-206ENST00000461055 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms