RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 C9orf163Q8N9P6 203 aa4.48□□□□□ -1.69
HLA-DQA1-205ENST00000460633 KIF25-AS1Q9Y6Z4 181 aa4.48□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SMCPP49901 116 aaPredicted RBP4.48□□□□□ -1.69
HLA-DQA1-205ENST00000460633 A0A096LNI7 61 aa4.47□□□□□ -1.69
HLA-DQA1-205ENST00000460633 A0A096LNT2 108 aa4.47□□□□□ -1.69
HLA-DQA1-205ENST00000460633 SPTAN1Q13813 2472 aaKnown RBP4.47□□□□□ -1.69
HLA-DQA1-205ENST00000460633 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
HLA-DQA1-205ENST00000460633 PRO0461Q9UI25 63 aa4.46□□□□□ -1.69
HLA-DQA1-205ENST00000460633 DSCAMO60469 2012 aa4.46□□□□□ -1.69
HLA-DQA1-205ENST00000460633 A0A087WVE0 104 aa4.46□□□□□ -1.7
HLA-DQA1-205ENST00000460633 ADAMTSL4-AS1Q5T5F5 129 aa4.46□□□□□ -1.7
HLA-DQA1-205ENST00000460633 SMIM11BQ8TCY0 68 aa4.45□□□□□ -1.7
HLA-DQA1-205ENST00000460633 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
HLA-DQA1-205ENST00000460633 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 PLXNB1O43157 2135 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 LYPD5Q6UWN5 251 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 COX8CQ7Z4L0 72 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 PCNX1Q96RV3 2341 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 FAM208BQ5VWN6 2430 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 BEAN1Q3B7T3 259 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 BDP1A6H8Y1 2624 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 ZFHX4Q86UP3 3567 aa4.44□□□□□ -1.7
HLA-DQA1-205ENST00000460633 NACAE9PAV3 2078 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 KLLNB2CW77 178 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 PRM2P04554 102 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 KRTAP1-3Q8IUG1 177 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 MED13LQ71F56 2210 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 KLK9Q2XQG4 91 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 FAM19A4Q96LR4 140 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 GOLGB1Q14789 3259 aaKnown RBP4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 WFDC10BQ8IUB3 73 aa4.43□□□□□ -1.7
HLA-DQA1-205ENST00000460633 ODF3L2Q3SX64 289 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 Q8NBF4 154 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 TRBV7-7A0A0K0K1E9 115 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 A0A1B0GUV1 79 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 C6orf99Q4VX62 202 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 RAI1Q7Z5J4 1906 aaPredicted RBP4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 SOSTDC1Q6X4U4 206 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 A0A087WYN8 130 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 CCKP06307 115 aa4.42□□□□□ -1.7
HLA-DQA1-205ENST00000460633 CACNA1AO00555 2505 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 NDUFC1O43677 76 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 SBSPONQ8IVN8 264 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 AVPP01185 164 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 COX6A2Q02221 97 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 A0A1B0GW54 56 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 A6NED7 52 aa4.41□□□□□ -1.7
HLA-DQA1-205ENST00000460633 Q9UF83 564 aa4.4□□□□□ -1.7
HLA-DQA1-205ENST00000460633 hDV103S1A0JD37 113 aa4.4□□□□□ -1.7
HLA-DQA1-205ENST00000460633 C10orf99Q6UWK7 81 aa4.4□□□□□ -1.7
HLA-DQA1-205ENST00000460633 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.71
HLA-DQA1-205ENST00000460633 IGKV2D-28P01615 120 aa4.4□□□□□ -1.71
HLA-DQA1-205ENST00000460633 Q9BRP9 147 aa4.4□□□□□ -1.71
HLA-DQA1-205ENST00000460633 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 NAV3Q8IVL0 2385 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 OXTP01178 125 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TRAV7A0A075B6U4 112 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 LINC00315P59091 139 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 AMELXQ99217 191 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 EIF4EBP3O60516 100 aaPredicted RBP4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
HLA-DQA1-205ENST00000460633 Q6ZQY7 126 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 XAGE1AQ9HD64 81 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 ARHGAP32A7KAX9 2087 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 C18orf65Q6ZTR6 163 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 CDC42SE2Q9NRR3 84 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 CYSRT1A8MQ03 144 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 WFDC10AQ9H1F0 79 aa4.38□□□□□ -1.71
HLA-DQA1-205ENST00000460633 KRTAP1-1Q07627 177 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 FHL2Q14192 279 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 ESRGQ1W209 222 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TET2Q6N021 2002 aaPredicted RBP4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 NBASA2RRP1 2371 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 AGRNO00468 2067 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
HLA-DQA1-205ENST00000460633 Q8N814 137 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 X6R8D5 127 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 SPACA4Q8TDM5 124 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 ACACBO00763 2458 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 IGLV1-50A0A075B6I6 118 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 NTM-AS1Q6ZSK4 140 aa4.36□□□□□ -1.71
HLA-DQA1-205ENST00000460633 K7EIL1 84 aa4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 Q5XG85 94 aa4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TNRC18O15417 2968 aaPredicted RBP4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 WNK1Q9H4A3 2382 aa4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 TRANK1O15050 2925 aa4.35□□□□□ -1.71
HLA-DQA1-205ENST00000460633 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
HLA-DQA1-205ENST00000460633 ACYP2P14621 99 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms