RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 M0R2N4 97 aa1.84□□□□□ -2.11
CCDC50-203ENST00000460064 PLAC8Q9NZF1 115 aa1.84□□□□□ -2.11
CCDC50-203ENST00000460064 IQGAP2Q13576 1575 aa1.84□□□□□ -2.12
CCDC50-203ENST00000460064 UGGT1Q9NYU2 1555 aa1.84□□□□□ -2.12
CCDC50-203ENST00000460064 TNRC6BQ9UPQ9 1833 aaKnown RBP1.84□□□□□ -2.12
CCDC50-203ENST00000460064 TET1Q8NFU7 2136 aa1.84□□□□□ -2.12
CCDC50-203ENST00000460064 FREM1Q5H8C1 2179 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 MROH2AA6NES4 1674 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 IQGAP1P46940 1657 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 ATP7AQ04656 1500 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
CCDC50-203ENST00000460064 LOC110117498A0A087WWA1 95 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 ZNF137PP52743 207 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 BAGE2Q86Y30 109 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 Q96NJ1 140 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 SNURFQ9Y675 71 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 DIP2AQ14689 1571 aa1.83□□□□□ -2.12
CCDC50-203ENST00000460064 LOC285556D6RIA3 1793 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 MYO7BQ6PIF6 2116 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 ADGRB2O60241 1585 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 CTXND1A0A1B0GTU2 59 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 S100A3P33764 101 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
CCDC50-203ENST00000460064 SPRR4Q96PI1 79 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 UTRNP46939 3433 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 EP400Q96L91 3159 aa1.82□□□□□ -2.12
CCDC50-203ENST00000460064 CDC42BPGQ6DT37 1551 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 ABCA6Q8N139 1617 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 SPAG17Q6Q759 2223 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 FXYD6-FXYD2A0A087WZ82 144 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 TRBV7-4A0A0J9YYF1 115 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 UQCR11O14957 56 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 UNQ6190/PRO20217Q6UXQ8 127 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 NKTRP30414 1462 aaKnown RBP1.81□□□□□ -2.12
CCDC50-203ENST00000460064 ALPK2Q86TB3 2170 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 SDK1Q7Z5N4 2213 aa1.81□□□□□ -2.12
CCDC50-203ENST00000460064 ITSN2Q9NZM3 1697 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 XRN1Q8IZH2 1706 aaKnown RBP1.8□□□□□ -2.12
CCDC50-203ENST00000460064 SIPA1L3O60292 1781 aaPredicted RBP1.8□□□□□ -2.12
CCDC50-203ENST00000460064 ZNF236Q9UL36 1845 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 H3BVH4 76 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 LYNX1P0DP58 116 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 SMIM5Q71RC9 77 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 BAGE3Q86Y29 109 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 LINC00846Q9NV44 126 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 PRRC2BQ5JSZ5 2229 aaKnown RBP1.8□□□□□ -2.12
CCDC50-203ENST00000460064 PHRF1Q9P1Y6 1649 aaKnown RBP1.8□□□□□ -2.12
CCDC50-203ENST00000460064 BIVM-ERCC5R4GMW8 1640 aa1.8□□□□□ -2.12
CCDC50-203ENST00000460064 TRGV1A0A0A0MS02 117 aa1.79□□□□□ -2.12
CCDC50-203ENST00000460064 ANGP03950 147 aaKnown RBP1.79□□□□□ -2.12
CCDC50-203ENST00000460064 MGPP08493 103 aa1.79□□□□□ -2.12
CCDC50-203ENST00000460064 SPINK7P58062 85 aa1.79□□□□□ -2.12
CCDC50-203ENST00000460064 DEFB107AQ8IZN7 70 aa1.79□□□□□ -2.12
CCDC50-203ENST00000460064 ATP7BP35670 1465 aa1.78□□□□□ -2.12
CCDC50-203ENST00000460064 HMGA1P17096 107 aaKnown RBP1.78□□□□□ -2.12
CCDC50-203ENST00000460064 GDF5OSQ5U4N7 250 aa1.78□□□□□ -2.12
CCDC50-203ENST00000460064 PAPPAQ13219 1627 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 MAST1Q9Y2H9 1570 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 EFCAB6Q5THR3 1501 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 TRAV1-2A0A0B4J238 106 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 HCRTO43612 131 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 SPATA8Q6RVD6 105 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 GNG13Q9P2W3 67 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 ZNF831Q5JPB2 1677 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 PIK3C2BO00750 1634 aa1.77□□□□□ -2.13
CCDC50-203ENST00000460064 SAMD9LQ8IVG5 1584 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 OTOGLQ3ZCN5 2332 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 IFI6P09912 130 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 CCL19Q99731 98 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 FAM103A1Q9BTL3 118 aaKnown RBP1.76□□□□□ -2.13
CCDC50-203ENST00000460064 CRYBG1Q9Y4K1 1723 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 SLIT1O75093 1534 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 TULP4Q9NRJ4 1543 aa1.76□□□□□ -2.13
CCDC50-203ENST00000460064 NUP188Q5SRE5 1749 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 RP1L1Q8IWN7 2480 aaPredicted RBP1.75□□□□□ -2.13
CCDC50-203ENST00000460064 A0A1B0GUT8 65 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 H0Y9P7 68 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 ARL14EPLP0DKL9 152 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 CAV3P56539 151 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 ATXN8Q156A1 80 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 ANKRD36A6QL64 1941 aa1.75□□□□□ -2.13
CCDC50-203ENST00000460064 DNAJC13O75165 2243 aa1.74□□□□□ -2.13
CCDC50-203ENST00000460064 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
CCDC50-203ENST00000460064 IFT172Q9UG01 1749 aa1.74□□□□□ -2.13
CCDC50-203ENST00000460064 PLCH1Q4KWH8 1693 aa1.74□□□□□ -2.13
CCDC50-203ENST00000460064 INTS1Q8N201 2190 aaKnown RBP1.74□□□□□ -2.13
CCDC50-203ENST00000460064 USP32Q8NFA0 1604 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 SAMD9Q5K651 1589 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 ACYP2P14621 99 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 COX17Q14061 63 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 Q6ZQY7 126 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 TMEM263Q8WUH6 116 aaKnown RBP1.73□□□□□ -2.13
CCDC50-203ENST00000460064 SMIM4Q8WVI0 70 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 ALS2Q96Q42 1657 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 UBR3Q6ZT12 1888 aa1.73□□□□□ -2.13
CCDC50-203ENST00000460064 A0A1B0GUL6 1792 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms