RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 FAM19A3Q7Z5A8 133 aa10.53□□□□□ -0.72
TMEM50B-205ENST00000459909 C15orf56Q8N910 161 aa10.53□□□□□ -0.72
TMEM50B-205ENST00000459909 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
TMEM50B-205ENST00000459909 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
TMEM50B-205ENST00000459909 MAP1LC3CQ9BXW4 147 aa10.52□□□□□ -0.73
TMEM50B-205ENST00000459909 CHTOPQ9Y3Y2 248 aaKnown RBP10.52□□□□□ -0.73
TMEM50B-205ENST00000459909 A0A087WZ39 114 aa10.51□□□□□ -0.73
TMEM50B-205ENST00000459909 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
TMEM50B-205ENST00000459909 CIRBPQ14011 172 aaKnown RBP10.51□□□□□ -0.73
TMEM50B-205ENST00000459909 PACRGQ96M98 296 aaPredicted RBP10.51□□□□□ -0.73
TMEM50B-205ENST00000459909 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
TMEM50B-205ENST00000459909 GVQW2A0A096LPI5 108 aaPredicted RBP10.5□□□□□ -0.73
TMEM50B-205ENST00000459909 IGLC3P0DOY3 106 aa10.5□□□□□ -0.73
TMEM50B-205ENST00000459909 ORAOV1Q8WV07 137 aa10.5□□□□□ -0.73
TMEM50B-205ENST00000459909 IGLV4-69A0A075B6H9 119 aa10.49□□□□□ -0.73
TMEM50B-205ENST00000459909 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
TMEM50B-205ENST00000459909 S100A2P29034 98 aa10.49□□□□□ -0.73
TMEM50B-205ENST00000459909 IGHV3-64A0A075B6Q5 118 aa10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 F8VRH5 84 aa10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
TMEM50B-205ENST00000459909 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
TMEM50B-205ENST00000459909 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
TMEM50B-205ENST00000459909 H3BRM9 83 aa10.47□□□□□ -0.73
TMEM50B-205ENST00000459909 OR10D4PQ8NGN7 298 aa10.47□□□□□ -0.73
TMEM50B-205ENST00000459909 DPH3Q96FX2 82 aa10.47□□□□□ -0.73
TMEM50B-205ENST00000459909 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.73
TMEM50B-205ENST00000459909 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.73
TMEM50B-205ENST00000459909 HIST3H2BBQ8N257 126 aa10.46□□□□□ -0.73
TMEM50B-205ENST00000459909 A0A087WYN8 130 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 SYS1-DBNDD2H3BUS1 97 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 PRSS2P07478 247 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 KRTDAPP60985 99 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 SNRPEP62304 92 aaKnown RBP10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 PMCHL2Q9BQD1 86 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 TOMM7Q9P0U1 55 aa10.45□□□□□ -0.74
TMEM50B-205ENST00000459909 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
TMEM50B-205ENST00000459909 C7orf33Q8WU49 177 aa10.44□□□□□ -0.74
TMEM50B-205ENST00000459909 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
TMEM50B-205ENST00000459909 CNBPP62633 177 aaKnown RBP10.43□□□□□ -0.74
TMEM50B-205ENST00000459909 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
TMEM50B-205ENST00000459909 TMA7Q9Y2S6 64 aaKnown RBP10.43□□□□□ -0.74
TMEM50B-205ENST00000459909 DPM2O94777 84 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 SLPIP03973 132 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 PLNP26678 52 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 SYCNQ0VAF6 134 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 SPACA4Q8TDM5 124 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 HIST1H2BLQ99880 126 aa10.42□□□□□ -0.74
TMEM50B-205ENST00000459909 C5orf52A6NGY3 159 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 C6orf226Q5I0X4 101 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 C2orf48Q96LS8 159 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 PLAC8Q9NZF1 115 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 LPAP08519 4548 aa10.41□□□□□ -0.74
TMEM50B-205ENST00000459909 IGKCP01834 107 aa10.4□□□□□ -0.74
TMEM50B-205ENST00000459909 CHTF8P0CG12 524 aa10.4□□□□□ -0.74
TMEM50B-205ENST00000459909 CKS1BP61024 79 aa10.4□□□□□ -0.74
TMEM50B-205ENST00000459909 Q8IZM0 81 aa10.4□□□□□ -0.74
TMEM50B-205ENST00000459909 KRTAP9-6A0A140TA67 174 aa10.39□□□□□ -0.75
TMEM50B-205ENST00000459909 NDUFA1O15239 70 aa10.39□□□□□ -0.75
TMEM50B-205ENST00000459909 KIAA0087Q14695 138 aa10.39□□□□□ -0.75
TMEM50B-205ENST00000459909 REG3GQ6UW15 175 aa10.39□□□□□ -0.75
TMEM50B-205ENST00000459909 COX7B2Q8TF08 81 aa10.39□□□□□ -0.75
TMEM50B-205ENST00000459909 C20orf202A1L168 122 aa10.38□□□□□ -0.75
TMEM50B-205ENST00000459909 F8WDY8 70 aa10.38□□□□□ -0.75
TMEM50B-205ENST00000459909 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
TMEM50B-205ENST00000459909 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
TMEM50B-205ENST00000459909 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
TMEM50B-205ENST00000459909 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
TMEM50B-205ENST00000459909 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
TMEM50B-205ENST00000459909 SPINK6Q6UWN8 80 aa10.36□□□□□ -0.75
TMEM50B-205ENST00000459909 IGLV5-39A0A0G2JS06 123 aa10.35□□□□□ -0.75
TMEM50B-205ENST00000459909 CXCL5P42830 114 aa10.35□□□□□ -0.75
TMEM50B-205ENST00000459909 HERVK_113P61574 105 aa10.35□□□□□ -0.75
TMEM50B-205ENST00000459909 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
TMEM50B-205ENST00000459909 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
TMEM50B-205ENST00000459909 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
TMEM50B-205ENST00000459909 TRBV30A0A0K0K1B3 111 aa10.32□□□□□ -0.76
TMEM50B-205ENST00000459909 RNF151Q2KHN1 245 aa10.32□□□□□ -0.76
TMEM50B-205ENST00000459909 MUC2Q02817 5179 aa10.32□□□□□ -0.76
TMEM50B-205ENST00000459909 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
TMEM50B-205ENST00000459909 LOC107984640A0A0U1RRK4 108 aa10.31□□□□□ -0.76
TMEM50B-205ENST00000459909 ATOH7Q8N100 152 aa10.31□□□□□ -0.76
TMEM50B-205ENST00000459909 AKR1D1P51857 326 aa10.3□□□□□ -0.76
TMEM50B-205ENST00000459909 RPL18AQ02543 176 aaKnown RBP10.3□□□□□ -0.76
TMEM50B-205ENST00000459909 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
TMEM50B-205ENST00000459909 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 LEPROTO15243 131 aa10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 GAGE2BQ13066 116 aa10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 MAJINQ3KP22 176 aa10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 STPG4Q8N801 248 aa10.29□□□□□ -0.76
TMEM50B-205ENST00000459909 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
TMEM50B-205ENST00000459909 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms