RNA–Protein interactions for RNA: ENST00000459746.5

CCDC66-209, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 628 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-209ENST00000459746 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
CCDC66-209ENST00000459746 H3BUA1 57 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 HMGN4O00479 90 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 KPNA4O00629 521 aaPredicted RBP0.44□□□□□ -2.34
CCDC66-209ENST00000459746 IGHV3-33P01772 117 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 MT1BP07438 61 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 APELAP0DMC3 54 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 DEFB130BP0DP73 79 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 DEFB130AP0DP74 79 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 DEFB131AP59861 70 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 DEFB1P60022 68 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 PCBD1P61457 104 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 PPP1R2P3Q6NXS1 205 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 CASC2Q6XLA1 102 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 C3orf62Q6ZUJ4 267 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 PHF5AQ7RTV0 110 aaKnown RBP0.44□□□□□ -2.34
CCDC66-209ENST00000459746 BIN3Q9NQY0 253 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 NAT8BQ9UHF3 227 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 ATPIF1Q9UII2 106 aa0.44□□□□□ -2.34
CCDC66-209ENST00000459746 C3orf85A0A1B0GTC6 90 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 TMEM189A5PLL7 270 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 A6NN06 94 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 TPST1O60507 370 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 FABP4P15090 132 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 RPS27P42677 84 aaKnown RBP0.43□□□□□ -2.34
CCDC66-209ENST00000459746 FOXA3P55318 350 aaPredicted RBP0.43□□□□□ -2.34
CCDC66-209ENST00000459746 SMIM21Q3B7S5 101 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 TRIQKQ629K1 86 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 LYPD5Q6UWN5 251 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 ATOH7Q8N100 152 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 C5orf17Q8NAS9 161 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 OR5AK2Q8NH90 309 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 GRPEL2Q8TAA5 225 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 C1orf54Q8WWF1 131 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 PLEKHB2Q96CS7 222 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 USMG5Q96IX5 58 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 AP1S3Q96PC3 154 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 HOPXQ9BPY8 73 aaPredicted RBP0.43□□□□□ -2.34
CCDC66-209ENST00000459746 OTORQ9NRC9 128 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 JPT1Q9UK76 154 aa0.43□□□□□ -2.34
CCDC66-209ENST00000459746 NOP16Q9Y3C1 178 aaKnown RBP0.43□□□□□ -2.34
CCDC66-209ENST00000459746 FAM223BA6NKX1 122 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 H3BNG1 76 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 M0R135 149 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 SULT1C4O75897 302 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 DBIP07108 87 aaKnown RBP0.42□□□□□ -2.34
CCDC66-209ENST00000459746 G0S2P27469 103 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 FXYD3Q14802 87 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 KLK9Q2XQG4 91 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 FAM223AQ8IWN6 122 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 OR5H6Q8NGV6 325 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 TSKUQ8WUA8 353 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 SMPXQ9UHP9 88 aa0.42□□□□□ -2.34
CCDC66-209ENST00000459746 LOC107984156A0A0G2JMH3 177 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 OR2H2O95918 312 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 EVI2AP22794 236 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 NDUFA6P56556 154 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 COPZ1P61923 177 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 LINC01556Q5JQF7 62 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 COX6B2Q6YFQ2 88 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 ARL17AQ8IVW1 177 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 PLAC4Q8WY50 150 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 CARD19Q96LW7 228 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 RHPN1-AS1Q9BWJ2 59 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 DPY30Q9C005 99 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 COA4Q9NYJ1 87 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 METTL1Q9UBP6 276 aaKnown RBP0.41□□□□□ -2.34
CCDC66-209ENST00000459746 MPC1Q9Y5U8 109 aa0.41□□□□□ -2.34
CCDC66-209ENST00000459746 TRAV2A0A0B4J234 112 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 MAP1LC3B2A6NCE7 125 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 A6NIN4 97 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 A8MTW9 85 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 BBIP1A8MTZ0 92 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 K7EP13 123 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 CDC42EP2O14613 210 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 PFDN1O60925 122 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 IGHV3-30P01768 117 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 TRACP01848 142 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 GYPBP06028 91 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 SAA2P0DJI9 122 aaPredicted RBP0.4□□□□□ -2.35
CCDC66-209ENST00000459746 IGHV3-30-5P0DP03 117 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 TPT1P13693 172 aaKnown RBP0.4□□□□□ -2.35
CCDC66-209ENST00000459746 HLA-DRB4P13762 266 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 SNRPD3P62318 126 aaKnown RBP0.4□□□□□ -2.35
CCDC66-209ENST00000459746 RPL38P63173 70 aaKnown RBP0.4□□□□□ -2.35
CCDC66-209ENST00000459746 TDRG1Q3Y452 100 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 KRTAP8-1Q8IUC2 63 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 LINC00269Q8N2A0 174 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 OR5A2Q8NGI9 324 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 RERGLQ9H628 205 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 IL20Q9NYY1 176 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 HLA-DRB4X5D2U9 266 aa0.4□□□□□ -2.35
CCDC66-209ENST00000459746 A0A096LNI7 61 aa0.39□□□□□ -2.35
CCDC66-209ENST00000459746 PRORSD1PA6NEY8 169 aa0.39□□□□□ -2.35
CCDC66-209ENST00000459746 CPSF4LA6NMK7 179 aaKnown RBP0.39□□□□□ -2.35
CCDC66-209ENST00000459746 MIF4GDA9UHW6 222 aaKnown RBP0.39□□□□□ -2.35
CCDC66-209ENST00000459746 TMEM238C9JI98 176 aa0.39□□□□□ -2.35
CCDC66-209ENST00000459746 GABARAPH6UMI1 98 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms