RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 WFDC10BQ8IUB3 73 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 C10orf126Q8N4M7 172 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 PRR34Q9NV39 138 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 KLK12Q9UKR0 248 aa6.09□□□□□ -1.43
VPS50-207ENST00000458530 TRAV8-3A0A0A6YYJ7 113 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 A6NDN8 102 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 K7EP13 123 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 NDUFA1O15239 70 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 APOMO95445 188 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 PRSS2P07478 247 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 DNAH10OSP0CZ25 163 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 XCL1P47992 114 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
VPS50-207ENST00000458530 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
VPS50-207ENST00000458530 BATFQ16520 125 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 COL5A1-AS1Q5SY13 56 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 MAPKAPK5-AS1Q8N8E1 139 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 COPS9Q8WXC6 57 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 CHCHD10Q8WYQ3 142 aaPredicted RBP6.08□□□□□ -1.44
VPS50-207ENST00000458530 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 UPK3BQ9BT76 320 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 TTTY13Q9BZ97 58 aa6.08□□□□□ -1.44
VPS50-207ENST00000458530 TIMM17BO60830 172 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 MALP21145 153 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 CXCL5P42830 114 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 SRSF9Q13242 221 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS50-207ENST00000458530 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 RMI2Q96E14 147 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 SPANXB1Q9NS25 103 aaPredicted RBP6.07□□□□□ -1.44
VPS50-207ENST00000458530 TP73-AS1Q9UF72 201 aa6.07□□□□□ -1.44
VPS50-207ENST00000458530 PTTG1IPP53801 180 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 BVES-AS1Q5T3Y7 98 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 Q6ZVH6 145 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 UBE2DNLQ8IWF7 75 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 Q8IZM0 81 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 ORAOV1Q8WV07 137 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 UBE2WQ96B02 151 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 LINC00588Q9Y4M8 146 aa6.06□□□□□ -1.44
VPS50-207ENST00000458530 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 CFAP161Q6P656 301 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 CEND1Q8N111 149 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 Q9H8V8 135 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 TOMM7Q9P0U1 55 aa6.05□□□□□ -1.44
VPS50-207ENST00000458530 IGLV10-54A0A075B6I4 117 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 FOXI1Q12951 378 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 C6orf226Q5I0X4 101 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 MEIG1Q5JSS6 88 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 ENHOQ6UWT2 76 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 TM2D2Q9BX73 214 aa6.04□□□□□ -1.44
VPS50-207ENST00000458530 IFITM1P13164 125 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 CKS1BP61024 79 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
VPS50-207ENST00000458530 ZNF625Q96I27 306 aaPredicted RBP6.03□□□□□ -1.44
VPS50-207ENST00000458530 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 SPANXCQ9NY87 97 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 APLNQ9ULZ1 77 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 COX11Q9Y6N1 276 aa6.03□□□□□ -1.44
VPS50-207ENST00000458530 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
VPS50-207ENST00000458530 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
VPS50-207ENST00000458530 IBA57-AS1B1ANH7 110 aa6.02□□□□□ -1.45
VPS50-207ENST00000458530 TTC32Q5I0X7 151 aa6.02□□□□□ -1.45
VPS50-207ENST00000458530 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
VPS50-207ENST00000458530 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.01□□□□□ -1.45
VPS50-207ENST00000458530 F8WDY8 70 aa6.01□□□□□ -1.45
VPS50-207ENST00000458530 LY6G6CO95867 125 aa6.01□□□□□ -1.45
VPS50-207ENST00000458530 SPAG11BQ08648 103 aa6.01□□□□□ -1.45
VPS50-207ENST00000458530 IGKV2D-24A0A075B6R9 120 aa6□□□□□ -1.45
VPS50-207ENST00000458530 SMIM13P0DJ93 91 aa6□□□□□ -1.45
VPS50-207ENST00000458530 FXYD2P54710 66 aa6□□□□□ -1.45
VPS50-207ENST00000458530 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
VPS50-207ENST00000458530 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
VPS50-207ENST00000458530 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
VPS50-207ENST00000458530 COX17Q14061 63 aa5.99□□□□□ -1.45
VPS50-207ENST00000458530 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
VPS50-207ENST00000458530 LITAFQ99732 161 aa5.99□□□□□ -1.45
VPS50-207ENST00000458530 Q9HAA7 133 aa5.99□□□□□ -1.45
VPS50-207ENST00000458530 NHP2Q9NX24 153 aaKnown RBP5.99□□□□□ -1.45
VPS50-207ENST00000458530 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
VPS50-207ENST00000458530 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
VPS50-207ENST00000458530 FAT2Q9NYQ8 4349 aa5.98□□□□□ -1.45
VPS50-207ENST00000458530 A0A1B0GWB2 263 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 LINC00158P58513 81 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 KIAA0087Q14695 138 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 MUSTN1Q8IVN3 82 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 RAB37Q96AX2 223 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 C2orf48Q96LS8 159 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
VPS50-207ENST00000458530 GVQW2A0A096LPI5 108 aaPredicted RBP5.96□□□□□ -1.46
VPS50-207ENST00000458530 A0A0B4J2C4 111 aa5.96□□□□□ -1.46
VPS50-207ENST00000458530 TRBV30A0A0K0K1B3 111 aa5.96□□□□□ -1.46
VPS50-207ENST00000458530 A0A1B0GVY2 172 aa5.96□□□□□ -1.46
VPS50-207ENST00000458530 LYRM7Q5U5X0 104 aa5.96□□□□□ -1.46
VPS50-207ENST00000458530 KRTAP26-1Q6PEX3 210 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms