RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 FLNAP21333 2647 aaKnown RBP7.59□□□□□ -1.19
RFX3-211ENST00000458034 IGKV2-28A0A075B6P5 120 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 IGKV2D-28P01615 120 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 PFN2P35080 140 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 XCL1P47992 114 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 DAD1P61803 113 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 CFAP161Q6P656 301 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 LINC00337Q8N6G1 96 aa7.59□□□□□ -1.19
RFX3-211ENST00000458034 MIFP14174 115 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 MALP21145 153 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 COX17Q14061 63 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 SMIM11BQ8TCY0 68 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 CHD6Q8TD26 2715 aa7.58□□□□□ -1.2
RFX3-211ENST00000458034 ATP5G1P05496 136 aa7.57□□□□□ -1.2
RFX3-211ENST00000458034 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
RFX3-211ENST00000458034 SMR3AQ99954 134 aa7.57□□□□□ -1.2
RFX3-211ENST00000458034 ANK3Q12955 4377 aaKnown RBP7.56□□□□□ -1.2
RFX3-211ENST00000458034 NOTCH3Q9UM47 2321 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 IGHV4-28A0A0C4DH34 117 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 NDUFV3P56181 108 aaKnown RBP7.56□□□□□ -1.2
RFX3-211ENST00000458034 DEFB135Q30KP9 77 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 MUC7Q8TAX7 377 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 FAM218AQ96MZ4 157 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 C11orf68Q9H3H3 251 aaKnown RBP7.56□□□□□ -1.2
RFX3-211ENST00000458034 EPG5Q9HCE0 2579 aa7.56□□□□□ -1.2
RFX3-211ENST00000458034 CSMD2Q7Z408 3487 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 A0A1B0GX51 115 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 NDUFC2O95298 119 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 SPART-AS1P0CW21 52 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 LINC00643Q86TS7 51 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
RFX3-211ENST00000458034 CENPEQ02224 2701 aa7.54□□□□□ -1.2
RFX3-211ENST00000458034 A0A096LPF7 62 aa7.54□□□□□ -1.2
RFX3-211ENST00000458034 ANGP03950 147 aaKnown RBP7.54□□□□□ -1.2
RFX3-211ENST00000458034 REG3AQ06141 175 aa7.54□□□□□ -1.2
RFX3-211ENST00000458034 CLPSL2Q6UWE3 100 aa7.54□□□□□ -1.2
RFX3-211ENST00000458034 LINC00269Q8N2A0 174 aa7.54□□□□□ -1.2
RFX3-211ENST00000458034 CHCHD10Q8WYQ3 142 aaPredicted RBP7.54□□□□□ -1.2
RFX3-211ENST00000458034 INAFM1C9JVW0 142 aa7.53□□□□□ -1.2
RFX3-211ENST00000458034 LELP1Q5T871 98 aa7.53□□□□□ -1.2
RFX3-211ENST00000458034 CCDC168Q8NDH2 2452 aa7.53□□□□□ -1.2
RFX3-211ENST00000458034 A0A087WYN8 130 aa7.52□□□□□ -1.21
RFX3-211ENST00000458034 Q8NAQ8 132 aa7.52□□□□□ -1.21
RFX3-211ENST00000458034 Q9HAA7 133 aa7.52□□□□□ -1.21
RFX3-211ENST00000458034 HIVEP2P31629 2446 aa7.51□□□□□ -1.21
RFX3-211ENST00000458034 LECT2O14960 151 aa7.51□□□□□ -1.21
RFX3-211ENST00000458034 KIAA0087Q14695 138 aa7.51□□□□□ -1.21
RFX3-211ENST00000458034 ORMDL1Q9P0S3 153 aa7.51□□□□□ -1.21
RFX3-211ENST00000458034 PDZD2O15018 2839 aa7.51□□□□□ -1.21
RFX3-211ENST00000458034 GAGE2AQ6NT46 116 aa7.5□□□□□ -1.21
RFX3-211ENST00000458034 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
RFX3-211ENST00000458034 KLK5Q9Y337 293 aaPredicted RBP7.5□□□□□ -1.21
RFX3-211ENST00000458034 DEFB4AO15263 64 aa7.49□□□□□ -1.21
RFX3-211ENST00000458034 SPAG11BQ08648 103 aa7.49□□□□□ -1.21
RFX3-211ENST00000458034 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
RFX3-211ENST00000458034 C22orf24Q9Y442 160 aa7.49□□□□□ -1.21
RFX3-211ENST00000458034 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
RFX3-211ENST00000458034 HTN3P15516 51 aa7.48□□□□□ -1.21
RFX3-211ENST00000458034 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
RFX3-211ENST00000458034 WFDC9Q8NEX5 89 aa7.48□□□□□ -1.21
RFX3-211ENST00000458034 OBSCN-AS1Q96MR7 158 aa7.48□□□□□ -1.21
RFX3-211ENST00000458034 CELA1Q9UNI1 258 aa7.48□□□□□ -1.21
RFX3-211ENST00000458034 SETXQ7Z333 2677 aaKnown RBP7.47□□□□□ -1.21
RFX3-211ENST00000458034 JMJD1CQ15652 2540 aa7.47□□□□□ -1.21
RFX3-211ENST00000458034 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
RFX3-211ENST00000458034 NHLRC4P0CG21 123 aaPredicted RBP7.47□□□□□ -1.21
RFX3-211ENST00000458034 SPATA3Q8NHX4 192 aa7.47□□□□□ -1.21
RFX3-211ENST00000458034 ACANP16112 2415 aa7.47□□□□□ -1.21
RFX3-211ENST00000458034 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
RFX3-211ENST00000458034 IGHV4-30-4P0DP06 118 aa7.46□□□□□ -1.22
RFX3-211ENST00000458034 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
RFX3-211ENST00000458034 C2CD3Q4AC94 2353 aa7.45□□□□□ -1.22
RFX3-211ENST00000458034 H3BQ85 93 aa7.45□□□□□ -1.22
RFX3-211ENST00000458034 TMEM256-PLSCR3K7ERE1 68 aa7.45□□□□□ -1.22
RFX3-211ENST00000458034 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
RFX3-211ENST00000458034 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
RFX3-211ENST00000458034 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
RFX3-211ENST00000458034 A0A0J9YWU9 116 aa7.44□□□□□ -1.22
RFX3-211ENST00000458034 H3BNG1 76 aa7.44□□□□□ -1.22
RFX3-211ENST00000458034 Q8N814 137 aa7.44□□□□□ -1.22
RFX3-211ENST00000458034 C14orf132Q9NPU4 83 aa7.44□□□□□ -1.22
RFX3-211ENST00000458034 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 NCR3O14931 201 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 NANOS2P60321 138 aaKnown RBP7.43□□□□□ -1.22
RFX3-211ENST00000458034 Q6JHZ5 121 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 KLK12Q9UKR0 248 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 MTORP42345 2549 aa7.43□□□□□ -1.22
RFX3-211ENST00000458034 NBPF19A0A087WUL8 3843 aa7.42□□□□□ -1.22
RFX3-211ENST00000458034 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
RFX3-211ENST00000458034 CYSRT1A8MQ03 144 aa7.41□□□□□ -1.22
RFX3-211ENST00000458034 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
RFX3-211ENST00000458034 SLPIP03973 132 aa7.41□□□□□ -1.22
RFX3-211ENST00000458034 CCKP06307 115 aa7.41□□□□□ -1.22
RFX3-211ENST00000458034 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
RFX3-211ENST00000458034 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
RFX3-211ENST00000458034 B5MCH6 92 aa7.4□□□□□ -1.22
RFX3-211ENST00000458034 GHRHP01286 108 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms