RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 C11orf72Q8NBR9 251 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 EP300Q09472 2414 aaPredicted RBP3.53□□□□□ -1.84
PCDH9-203ENST00000456367 DSCAMO60469 2012 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 IGLV4-60A0A075B6I1 120 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 TRAV10A0A0B4J240 114 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
PCDH9-203ENST00000456367 ANKHD1Q8IWZ3 2542 aaKnown RBP3.53□□□□□ -1.84
PCDH9-203ENST00000456367 LY6G6DO95868 133 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 TP53AIP1Q9HCN2 124 aa3.53□□□□□ -1.84
PCDH9-203ENST00000456367 LOC100131303A0A0U1RQF7 123 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 DEFB135Q30KP9 77 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 ATP11AUNQ6ZP68 121 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 PRR15Q8IV56 129 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 BBC3Q96PG8 261 aaPredicted RBP3.52□□□□□ -1.85
PCDH9-203ENST00000456367 TM2D3Q9BRN9 247 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 GPR179Q6PRD1 2367 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 Q6ZSN1 163 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 GOLGB1Q14789 3259 aaKnown RBP3.52□□□□□ -1.85
PCDH9-203ENST00000456367 DEFB113Q30KQ7 82 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 ZNF702PQ9H963 129 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
PCDH9-203ENST00000456367 Q9UF83 564 aa3.52□□□□□ -1.85
PCDH9-203ENST00000456367 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 MAPK1IP1LQ8NDC0 245 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 PTPRBP23467 1997 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 NANOS2P60321 138 aaKnown RBP3.51□□□□□ -1.85
PCDH9-203ENST00000456367 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 C1orf64Q8NEQ6 169 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 IGKV2-28A0A075B6P5 120 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 IGKV2D-28P01615 120 aa3.51□□□□□ -1.85
PCDH9-203ENST00000456367 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
PCDH9-203ENST00000456367 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
PCDH9-203ENST00000456367 PRM2P04554 102 aa3.5□□□□□ -1.85
PCDH9-203ENST00000456367 OBSCN-AS1Q96MR7 158 aa3.5□□□□□ -1.85
PCDH9-203ENST00000456367 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
PCDH9-203ENST00000456367 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
PCDH9-203ENST00000456367 LINC00474Q9P2X8 69 aa3.49□□□□□ -1.85
PCDH9-203ENST00000456367 LINC00167Q96N53 147 aa3.49□□□□□ -1.85
PCDH9-203ENST00000456367 Q8NBF4 154 aa3.49□□□□□ -1.85
PCDH9-203ENST00000456367 RAI1Q7Z5J4 1906 aaPredicted RBP3.49□□□□□ -1.85
PCDH9-203ENST00000456367 A0A0J9YWU9 116 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 DNAJC9-AS1A6NH13 148 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 LCA10Q71F78 164 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
PCDH9-203ENST00000456367 DEFB4AO15263 64 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 IGHV4-30-4P0DP06 118 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 Q1T7F1 81 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 C10orf99Q6UWK7 81 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 GVQW2A0A096LPI5 108 aaPredicted RBP3.47□□□□□ -1.85
PCDH9-203ENST00000456367 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 A0A087WSZ3 146 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 A8MUN3 132 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 Q5XG85 94 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 LOC101927531A0A1B0GV80 90 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 IGHV4-31P0DP07 118 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 ACYP2P14621 99 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 C11orf45Q8TAV5 145 aa3.47□□□□□ -1.85
PCDH9-203ENST00000456367 TRAV22A0A0B4J277 110 aa3.46□□□□□ -1.85
PCDH9-203ENST00000456367 KIAA0087Q14695 138 aa3.46□□□□□ -1.85
PCDH9-203ENST00000456367 Q6ZTC4 211 aa3.46□□□□□ -1.85
PCDH9-203ENST00000456367 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 IGLV6-57P01721 117 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 TECTAO75443 2155 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 UTRNP46939 3433 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 DEFB131BA0A096LNP1 70 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 IGLV1-51P01701 117 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 LYPD5Q6UWN5 251 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 SPANXA2-OT1Q8N9U9 137 aa3.46□□□□□ -1.86
PCDH9-203ENST00000456367 A0A1B0GU69 56 aa3.45□□□□□ -1.86
PCDH9-203ENST00000456367 A8MTW9 85 aa3.45□□□□□ -1.86
PCDH9-203ENST00000456367 Q9BRP9 147 aa3.45□□□□□ -1.86
PCDH9-203ENST00000456367 NBASA2RRP1 2371 aa3.45□□□□□ -1.86
PCDH9-203ENST00000456367 C2CD3Q4AC94 2353 aa3.45□□□□□ -1.86
PCDH9-203ENST00000456367 WNK1Q9H4A3 2382 aa3.44□□□□□ -1.86
PCDH9-203ENST00000456367 A0A096LNI7 61 aa3.44□□□□□ -1.86
PCDH9-203ENST00000456367 RIF1Q5UIP0 2472 aaKnown RBP3.44□□□□□ -1.86
PCDH9-203ENST00000456367 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
PCDH9-203ENST00000456367 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.43□□□□□ -1.86
PCDH9-203ENST00000456367 COA5Q86WW8 74 aa3.43□□□□□ -1.86
PCDH9-203ENST00000456367 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
PCDH9-203ENST00000456367 Q6ZRU5 148 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 MDFIQ99750 246 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 Q6ZRX8 168 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 C18orf65Q6ZTR6 163 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 C6orf48Q9UBA6 75 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 SORL1Q92673 2214 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 MOBPQ13875 183 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 C7orf33Q8WU49 177 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 CDSNQ15517 529 aa3.42□□□□□ -1.86
PCDH9-203ENST00000456367 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
PCDH9-203ENST00000456367 C19orf84I3L1E1 186 aa3.41□□□□□ -1.86
PCDH9-203ENST00000456367 LINC00528Q8N1L1 170 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms