RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 LITAFQ99732 161 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 CREBBPQ92793 2442 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 LYPD5Q6UWN5 251 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 C4orf48Q5BLP8 95 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 SPATA3Q8NHX4 192 aa5.38□□□□□ -1.55
RIF1-206ENST00000453091 TMEM254Q8TBM7 123 aa5.37□□□□□ -1.55
RIF1-206ENST00000453091 EGFEM1PQ0D2K5 195 aa5.37□□□□□ -1.55
RIF1-206ENST00000453091 TTC28Q96AY4 2481 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 KIAA0087Q14695 138 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 PCSK5Q92824 1860 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 PCNX2A6NKB5 2137 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 PCNX1Q96RV3 2341 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 REG3GQ6UW15 175 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 DNAH12Q6ZR08 3092 aa5.36□□□□□ -1.55
RIF1-206ENST00000453091 IGHV3OR16-9A0A0B4J2B5 98 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 Q9BRP9 147 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 SBSPONQ8IVN8 264 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 NDUFC1O43677 76 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 DOPEY2Q9Y3R5 2298 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 SEC61GP60059 68 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 LRP4O75096 1905 aa5.35□□□□□ -1.55
RIF1-206ENST00000453091 SPINK1P00995 79 aa5.34□□□□□ -1.55
RIF1-206ENST00000453091 NACAE9PAV3 2078 aa5.34□□□□□ -1.55
RIF1-206ENST00000453091 CRYGAP11844 174 aa5.34□□□□□ -1.55
RIF1-206ENST00000453091 ST20-AS1Q8NBB2 130 aa5.34□□□□□ -1.55
RIF1-206ENST00000453091 C6orf48Q9UBA6 75 aa5.34□□□□□ -1.55
RIF1-206ENST00000453091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.34□□□□□ -1.551e-6■■■■■ 44.1
RIF1-206ENST00000453091 C14orf177Q52M58 125 aa5.34□□□□□ -1.56
RIF1-206ENST00000453091 NOTCH3Q9UM47 2321 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 CIRBP-AS1Q8TBR5 109 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
RIF1-206ENST00000453091 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
RIF1-206ENST00000453091 PCNTO95613 3336 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 TM2D3Q9BRN9 247 aa5.33□□□□□ -1.56
RIF1-206ENST00000453091 C16orf95Q9H693 158 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 FAM208BQ5VWN6 2430 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 H0Y9P7 68 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 C22orf24Q9Y442 160 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 ARHGAP32A7KAX9 2087 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 CEP350Q5VT06 3117 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
RIF1-206ENST00000453091 PLXNB1O43157 2135 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 ZGRF1Q86YA3 2104 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 TNCP24821 2201 aa5.32□□□□□ -1.56
RIF1-206ENST00000453091 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
RIF1-206ENST00000453091 LINC01556Q5JQF7 62 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 A0A1W2PNN7 141 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 NCOR2Q9Y618 2525 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 PLCE1Q9P212 2302 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 HCG22E2RYF7 251 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 X6R8D5 127 aa5.31□□□□□ -1.56
RIF1-206ENST00000453091 A0A1B0GUV1 79 aa5.3□□□□□ -1.56
RIF1-206ENST00000453091 DSCAMO60469 2012 aa5.3□□□□□ -1.56
RIF1-206ENST00000453091 IGLV5-45A0A087WSX0 123 aa5.3□□□□□ -1.56
RIF1-206ENST00000453091 WNK1Q9H4A3 2382 aa5.3□□□□□ -1.56
RIF1-206ENST00000453091 KRTAP24-1Q3LI83 254 aa5.3□□□□□ -1.56
RIF1-206ENST00000453091 PRRC2AP48634 2157 aaKnown RBP5.3□□□□□ -1.56
RIF1-206ENST00000453091 Q6ZQT0 140 aa5.29□□□□□ -1.56
RIF1-206ENST00000453091 RAI1Q7Z5J4 1906 aaPredicted RBP5.29□□□□□ -1.56
RIF1-206ENST00000453091 FSHBP01225 129 aa5.29□□□□□ -1.56
RIF1-206ENST00000453091 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
RIF1-206ENST00000453091 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
RIF1-206ENST00000453091 CSPG4Q6UVK1 2322 aa5.28□□□□□ -1.56
RIF1-206ENST00000453091 EML5Q05BV3 1969 aa5.28□□□□□ -1.56
RIF1-206ENST00000453091 FAM168BA1KXE4 195 aa5.27□□□□□ -1.57
RIF1-206ENST00000453091 OTOGLQ3ZCN5 2332 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 C1orf64Q8NEQ6 169 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 PIEZO2Q9H5I5 2752 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 IGLV5-52A0A0A0MRZ9 124 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 ANKHD1Q8IWZ3 2542 aaKnown RBP5.26□□□□□ -1.57
RIF1-206ENST00000453091 KRTAP10-3P60369 221 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 LINC01561Q8N1V8 128 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 NAV3Q8IVL0 2385 aa5.26□□□□□ -1.57
RIF1-206ENST00000453091 PHF5AQ7RTV0 110 aaKnown RBP5.26□□□□□ -1.57
RIF1-206ENST00000453091 NOTCH2Q04721 2471 aa5.25□□□□□ -1.57
RIF1-206ENST00000453091 HIVEP2P31629 2446 aa5.25□□□□□ -1.57
RIF1-206ENST00000453091 IGF2RP11717 2491 aa5.25□□□□□ -1.57
RIF1-206ENST00000453091 CHTF8P0CG12 524 aa5.25□□□□□ -1.57
RIF1-206ENST00000453091 ELOF1P60002 83 aaKnown RBP5.25□□□□□ -1.57
RIF1-206ENST00000453091 C2orf48Q96LS8 159 aa5.25□□□□□ -1.57
RIF1-206ENST00000453091 CXCL6P80162 114 aa5.24□□□□□ -1.57
RIF1-206ENST00000453091 IL17DQ8TAD2 202 aa5.24□□□□□ -1.57
RIF1-206ENST00000453091 ZNF706Q9Y5V0 76 aaPredicted RBP5.24□□□□□ -1.57
RIF1-206ENST00000453091 COL5A1P20908 1838 aaPredicted RBP5.23□□□□□ -1.57
RIF1-206ENST00000453091 HIVEP3Q5T1R4 2406 aa5.23□□□□□ -1.57
RIF1-206ENST00000453091 SERTAD4-AS1Q5TG53 156 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 MDFIQ99750 246 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 Q6ZRP5 223 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 LINC00476Q8WZB0 136 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 COL4A2P08572 1712 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 ZNF575Q86XF7 245 aa5.22□□□□□ -1.57
RIF1-206ENST00000453091 PTPRBP23467 1997 aa5.21□□□□□ -1.58
RIF1-206ENST00000453091 NUPR2A6NF83 97 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms