RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 VCX2Q9H322 139 aa5.36□□□□□ -1.55
RFX3-209ENST00000451859 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
RFX3-209ENST00000451859 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
RFX3-209ENST00000451859 PRSS47A8MTI9 375 aa5.35□□□□□ -1.55
RFX3-209ENST00000451859 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
RFX3-209ENST00000451859 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
RFX3-209ENST00000451859 NXT2Q9NPJ8 142 aaKnown RBP5.35□□□□□ -1.55
RFX3-209ENST00000451859 TMEM218A2RU14 115 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 F8WDY8 70 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 PRSS2P07478 247 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 IFITM2Q01629 132 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 KIAA0087Q14695 138 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 COMMD7Q86VX2 200 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 PACRGQ96M98 296 aaPredicted RBP5.34□□□□□ -1.55
RFX3-209ENST00000451859 LINC01600Q96MT4 127 aa5.34□□□□□ -1.55
RFX3-209ENST00000451859 IGIPA6NJ69 53 aa5.33□□□□□ -1.56
RFX3-209ENST00000451859 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFX3-209ENST00000451859 UQCC3Q6UW78 93 aa5.33□□□□□ -1.56
RFX3-209ENST00000451859 AMELXQ99217 191 aa5.33□□□□□ -1.56
RFX3-209ENST00000451859 TRBV30A0A0K0K1B3 111 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 NDUFC2-KCTD14E9PQ53 114 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 K7EMI3 77 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 M0QXV9 152 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 TLX1NBP0CAT3 122 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 S100PP25815 95 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 CKS1BP61024 79 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 UBE2BP63146 152 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 SCGB3A1Q96QR1 104 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
RFX3-209ENST00000451859 GEMIN7Q9H840 131 aaKnown RBP5.32□□□□□ -1.56
RFX3-209ENST00000451859 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
RFX3-209ENST00000451859 TRAV9-1A0A075B6T8 112 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 HERVK_113P63121 156 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 PAPPA-AS1Q5QFB9 102 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
RFX3-209ENST00000451859 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 SEC11CQ9BY50 192 aa5.31□□□□□ -1.56
RFX3-209ENST00000451859 LRP2P98164 4655 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 G0S2P27469 103 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 Q8IZM0 81 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 LINC01561Q8N1V8 128 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 RPS10P5Q9NQ39 176 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 SMCO4Q9NRQ5 59 aa5.3□□□□□ -1.56
RFX3-209ENST00000451859 IGLV7-43P04211 117 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 NPSP0C0P6 89 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 KRTAP10-8P60410 259 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 SEC11AP67812 179 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 FA2HQ7L5A8 372 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 ERASQ7Z444 233 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 GNB1LQ9BYB4 327 aa5.29□□□□□ -1.56
RFX3-209ENST00000451859 SPINK8P0C7L1 97 aa5.28□□□□□ -1.56
RFX3-209ENST00000451859 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
RFX3-209ENST00000451859 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
RFX3-209ENST00000451859 F8VRH5 84 aa5.27□□□□□ -1.57
RFX3-209ENST00000451859 NDUFA6P56556 154 aa5.27□□□□□ -1.57
RFX3-209ENST00000451859 PRR26Q8N8Z3 221 aa5.27□□□□□ -1.57
RFX3-209ENST00000451859 TINCRA0A1B0GVN0 87 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 SMIM1B2RUZ4 78 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 H0Y9J4 135 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 RAB5BP61020 215 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 PMVKQ15126 192 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 RHEBQ15382 184 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 COX19Q49B96 90 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 COX7B2Q8TF08 81 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 C22orf24Q9Y442 160 aa5.26□□□□□ -1.57
RFX3-209ENST00000451859 APOC3P02656 99 aa5.25□□□□□ -1.57
RFX3-209ENST00000451859 CXCL5P42830 114 aa5.25□□□□□ -1.57
RFX3-209ENST00000451859 PMCHL1Q16048 86 aa5.25□□□□□ -1.57
RFX3-209ENST00000451859 C10orf91Q5T1B1 145 aa5.25□□□□□ -1.57
RFX3-209ENST00000451859 CARHSP1Q9Y2V2 147 aaKnown RBP5.25□□□□□ -1.57
RFX3-209ENST00000451859 TRAPPC1Q9Y5R8 145 aa5.25□□□□□ -1.57
RFX3-209ENST00000451859 LINC01546A6NGU7 62 aa5.24□□□□□ -1.57
RFX3-209ENST00000451859 LINC01549A6NIU2 74 aa5.24□□□□□ -1.57
RFX3-209ENST00000451859 PDZD11Q5EBL8 140 aa5.24□□□□□ -1.57
RFX3-209ENST00000451859 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
RFX3-209ENST00000451859 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 GAGE10A6NGK3 116 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 RPL37AP8A6NKH3 93 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 H3BRM9 83 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 LBHQ53QV2 105 aaPredicted RBP5.23□□□□□ -1.57
RFX3-209ENST00000451859 MRPL55Q7Z7F7 128 aaKnown RBP5.23□□□□□ -1.57
RFX3-209ENST00000451859 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
RFX3-209ENST00000451859 LPAP08519 4548 aa5.22□□□□□ -1.57
RFX3-209ENST00000451859 A0A096LNJ9 63 aa5.22□□□□□ -1.57
RFX3-209ENST00000451859 HBDP02042 147 aa5.22□□□□□ -1.57
RFX3-209ENST00000451859 PFN2P35080 140 aa5.22□□□□□ -1.57
RFX3-209ENST00000451859 NDUFA5Q16718 116 aa5.22□□□□□ -1.57
RFX3-209ENST00000451859 NUPR1O60356 82 aa5.21□□□□□ -1.58
RFX3-209ENST00000451859 SCO1O75880 301 aa5.21□□□□□ -1.58
RFX3-209ENST00000451859 ATP5LO75964 103 aa5.21□□□□□ -1.58
RFX3-209ENST00000451859 SNAPINO95295 136 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms