RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 VCYO14598 125 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 TRIAP1O43715 76 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 TSHBP01222 138 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
CCDC171-203ENST00000449575 C6orf226Q5I0X4 101 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 VPS13DQ5THJ4 4388 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 FHL2Q14192 279 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
CCDC171-203ENST00000449575 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
CCDC171-203ENST00000449575 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-203ENST00000449575 VSIG2Q96IQ7 327 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 A0A087WWL8 130 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 Q6ZSN1 163 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 Q9UF83 564 aa6.86□□□□□ -1.31
CCDC171-203ENST00000449575 CXCL5P42830 114 aa6.85□□□□□ -1.31
CCDC171-203ENST00000449575 HERVK_113P63121 156 aa6.85□□□□□ -1.31
CCDC171-203ENST00000449575 ZNRF2Q8NHG8 242 aa6.85□□□□□ -1.31
CCDC171-203ENST00000449575 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
CCDC171-203ENST00000449575 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
CCDC171-203ENST00000449575 LST1O00453 97 aa6.84□□□□□ -1.31
CCDC171-203ENST00000449575 NXPH4O95158 308 aa6.84□□□□□ -1.31
CCDC171-203ENST00000449575 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
CCDC171-203ENST00000449575 FAM74A4Q5TZK3 123 aa6.84□□□□□ -1.31
CCDC171-203ENST00000449575 TRGV4A0A0C4DH28 118 aa6.84□□□□□ -1.31
CCDC171-203ENST00000449575 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
CCDC171-203ENST00000449575 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
CCDC171-203ENST00000449575 A0A0J9YXY3 114 aa6.83□□□□□ -1.32
CCDC171-203ENST00000449575 COX7CP15954 63 aa6.83□□□□□ -1.32
CCDC171-203ENST00000449575 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-203ENST00000449575 A0A096LPF7 62 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 MALP21145 153 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 RHOHQ15669 191 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 GAGE2AQ6NT46 116 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 PRO0255Q9UI72 69 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 RYR3Q15413 4870 aa6.82□□□□□ -1.32
CCDC171-203ENST00000449575 TRBV27A0A0K0K1C4 114 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 PAX4O43316 350 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 CRYGAP11844 174 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
CCDC171-203ENST00000449575 LINC00315P59091 139 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 RPL39P62891 51 aaKnown RBP6.81□□□□□ -1.32
CCDC171-203ENST00000449575 PIK3CD-AS1Q5SR53 167 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 TRBV6-5A0A0K0K1A5 114 aa6.81□□□□□ -1.32
CCDC171-203ENST00000449575 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 ATOX1O00244 68 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 PRSS2P07478 247 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 RYR2Q92736 4967 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 GYPEP15421 78 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 K7EQD1 137 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 MIAQ16674 131 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
CCDC171-203ENST00000449575 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 I3L3M4 83 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 SUMO4Q6EEV6 95 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 TRAV8-3A0A0A6YYJ7 113 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 TRACP01848 142 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 LITAFQ99732 161 aa6.79□□□□□ -1.32
CCDC171-203ENST00000449575 TRBV6-4A0A1B0GX49 114 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 F5H697 171 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 LY6G6CO95867 125 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 IGHV3-30-3P0DP02 117 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 ESRGQ1W209 222 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 H3BNG1 76 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 TIMM17BO60830 172 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 TMEM258P61165 79 aa6.78□□□□□ -1.32
CCDC171-203ENST00000449575 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.33
CCDC171-203ENST00000449575 DAND5Q8N907 189 aa6.77□□□□□ -1.33
CCDC171-203ENST00000449575 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
CCDC171-203ENST00000449575 LINC00588Q9Y4M8 146 aa6.77□□□□□ -1.33
CCDC171-203ENST00000449575 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 A0A0J9YXV3 536 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 LCE6AA0A183 80 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 C2orf48Q96LS8 159 aa6.76□□□□□ -1.33
CCDC171-203ENST00000449575 M0QY20 66 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 COX7A2LO14548 114 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 HIST1H4AP62805 103 aaKnown RBP6.75□□□□□ -1.33
CCDC171-203ENST00000449575 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 LYPD5Q6UWN5 251 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
CCDC171-203ENST00000449575 IGLV4-3A0A075B6K6 122 aa6.74□□□□□ -1.33
CCDC171-203ENST00000449575 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
CCDC171-203ENST00000449575 CIRBPQ14011 172 aaKnown RBP6.74□□□□□ -1.33
CCDC171-203ENST00000449575 PYGO1Q9Y3Y4 419 aa6.74□□□□□ -1.33
CCDC171-203ENST00000449575 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
CCDC171-203ENST00000449575 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
CCDC171-203ENST00000449575 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
CCDC171-203ENST00000449575 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms