RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
USP39-206ENST00000448971 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
USP39-206ENST00000448971 STPG4Q8N801 248 aa9.24□□□□□ -0.93
USP39-206ENST00000448971 URB1-AS1Q96HZ7 61 aa9.24□□□□□ -0.93
USP39-206ENST00000448971 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 F8WDY8 70 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 PRSS2P07478 247 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 LINC01561Q8N1V8 128 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
USP39-206ENST00000448971 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
USP39-206ENST00000448971 A0A096LNJ9 63 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 PMVKQ15126 192 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 PLAC8Q9NZF1 115 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
USP39-206ENST00000448971 NDUFA6P56556 154 aa9.21□□□□□ -0.94
USP39-206ENST00000448971 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
USP39-206ENST00000448971 TINCRA0A1B0GVN0 87 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 KIAA0087Q14695 138 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 RNF151Q2KHN1 245 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 UNQ6190/PRO20217Q6UXQ8 127 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
USP39-206ENST00000448971 TRGC2P03986 189 aa9.19□□□□□ -0.94
USP39-206ENST00000448971 CKS1BP61024 79 aa9.19□□□□□ -0.94
USP39-206ENST00000448971 C2orf82Q6UX34 121 aa9.19□□□□□ -0.94
USP39-206ENST00000448971 Q8IZM0 81 aa9.19□□□□□ -0.94
USP39-206ENST00000448971 CHCHD1Q96BP2 118 aaKnown RBP9.19□□□□□ -0.94
USP39-206ENST00000448971 TRBV30A0A0K0K1B3 111 aa9.18□□□□□ -0.94
USP39-206ENST00000448971 ATP5LO75964 103 aa9.18□□□□□ -0.94
USP39-206ENST00000448971 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
USP39-206ENST00000448971 HSBP1O75506 76 aa9.17□□□□□ -0.94
USP39-206ENST00000448971 PDZD11Q5EBL8 140 aa9.17□□□□□ -0.94
USP39-206ENST00000448971 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
USP39-206ENST00000448971 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
USP39-206ENST00000448971 SMIM1B2RUZ4 78 aa9.16□□□□□ -0.94
USP39-206ENST00000448971 H3BRM9 83 aa9.16□□□□□ -0.94
USP39-206ENST00000448971 SPINK8P0C7L1 97 aa9.15□□□□□ -0.94
USP39-206ENST00000448971 IGLC3P0DOY3 106 aa9.15□□□□□ -0.94
USP39-206ENST00000448971 CXCL5P42830 114 aa9.15□□□□□ -0.94
USP39-206ENST00000448971 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
USP39-206ENST00000448971 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
USP39-206ENST00000448971 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
USP39-206ENST00000448971 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
USP39-206ENST00000448971 Q6ZRP5 223 aa9.14□□□□□ -0.95
USP39-206ENST00000448971 COLCA2A8K830 154 aa9.13□□□□□ -0.95
USP39-206ENST00000448971 F8VRH5 84 aa9.13□□□□□ -0.95
USP39-206ENST00000448971 SCO1O75880 301 aa9.13□□□□□ -0.95
USP39-206ENST00000448971 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
USP39-206ENST00000448971 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
USP39-206ENST00000448971 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
USP39-206ENST00000448971 NDUFC2-KCTD14E9PQ53 114 aa9.12□□□□□ -0.95
USP39-206ENST00000448971 ZNF22P17026 224 aaPredicted RBP9.12□□□□□ -0.95
USP39-206ENST00000448971 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
USP39-206ENST00000448971 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
USP39-206ENST00000448971 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
USP39-206ENST00000448971 SERF1AO75920 110 aa9.11□□□□□ -0.95
USP39-206ENST00000448971 FAM19A5Q7Z5A7 132 aaPredicted RBP9.11□□□□□ -0.95
USP39-206ENST00000448971 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
USP39-206ENST00000448971 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
USP39-206ENST00000448971 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
USP39-206ENST00000448971 TMEM170BQ5T4T1 132 aa9.1□□□□□ -0.95
USP39-206ENST00000448971 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
USP39-206ENST00000448971 LRP2P98164 4655 aa9.09□□□□□ -0.95
USP39-206ENST00000448971 TNXBP22105 4242 aa9.09□□□□□ -0.95
USP39-206ENST00000448971 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
USP39-206ENST00000448971 H0Y8G0 127 aa9.08□□□□□ -0.96
USP39-206ENST00000448971 LINC00310P59036 64 aa9.08□□□□□ -0.96
USP39-206ENST00000448971 TRAV12-1A0A0B4J245 112 aa9.07□□□□□ -0.96
USP39-206ENST00000448971 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
USP39-206ENST00000448971 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
USP39-206ENST00000448971 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
USP39-206ENST00000448971 M0QXV9 152 aa9.06□□□□□ -0.96
USP39-206ENST00000448971 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
USP39-206ENST00000448971 XP32Q5T750 250 aa9.05□□□□□ -0.96
USP39-206ENST00000448971 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
USP39-206ENST00000448971 HSPB8Q9UJY1 196 aa9.04□□□□□ -0.96
USP39-206ENST00000448971 FABP4P15090 132 aa9.03□□□□□ -0.96
USP39-206ENST00000448971 UBE2BP63146 152 aa9.03□□□□□ -0.96
USP39-206ENST00000448971 NUPR1O60356 82 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BKO60814 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BJP06899 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BOP23527 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BBP33778 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BDP58876 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BCP62807 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST2H2BEQ16778 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BHQ93079 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BNQ99877 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 HIST1H2BMQ99879 126 aa9.02□□□□□ -0.97
USP39-206ENST00000448971 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
USP39-206ENST00000448971 PFN2P35080 140 aa9.01□□□□□ -0.97
USP39-206ENST00000448971 ODF1Q14990 250 aa9.01□□□□□ -0.97
USP39-206ENST00000448971 C1orf137Q5JT78 98 aa9.01□□□□□ -0.97
USP39-206ENST00000448971 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms