RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 IFNA17P01571 189 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 AKR1C3P42330 323 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 SNRPD3P62318 126 aaKnown RBP2.81□□□□□ -1.96
COL11A1-205ENST00000447608 PSMG4Q5JS54 123 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 PATE2Q6UY27 113 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 SNX29P2Q8IUI4 249 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 TP53RKQ96S44 253 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 NAT8BQ9UHF3 227 aa2.81□□□□□ -1.96
COL11A1-205ENST00000447608 DEFB131BA0A096LNP1 70 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 C3orf85A0A1B0GTC6 90 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 SMIM31A0A1B0GVY4 71 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 TMEM189A5PLL7 270 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 HIST1H2BKO60814 126 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 HIST1H2BJP06899 126 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 IGLC1P0CG04 106 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 SLC25A4P12235 298 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 HLA-DRB4P13762 266 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 NCS1P62166 190 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 HBBP68871 147 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
COL11A1-205ENST00000447608 COA5Q86WW8 74 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 LINC00467Q9BRT7 94 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 MRPL36Q9P0J6 103 aaKnown RBP2.8□□□□□ -1.96
COL11A1-205ENST00000447608 COPZ2Q9P299 210 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 COMMD3Q9UBI1 195 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 HLA-DRB4X5D2U9 266 aa2.8□□□□□ -1.96
COL11A1-205ENST00000447608 TRAV5A0A0B4J249 113 aa2.79□□□□□ -1.96
COL11A1-205ENST00000447608 CEBPZOSA8MTT3 80 aa2.79□□□□□ -1.96
COL11A1-205ENST00000447608 ZNF705BP0CI00 300 aaPredicted RBP2.79□□□□□ -1.96
COL11A1-205ENST00000447608 ETV6P41212 452 aa2.79□□□□□ -1.96
COL11A1-205ENST00000447608 LSM3P62310 102 aaKnown RBP2.79□□□□□ -1.96
COL11A1-205ENST00000447608 FP248Q71RG6 208 aaPredicted RBP2.79□□□□□ -1.96
COL11A1-205ENST00000447608 C14orf132Q9NPU4 83 aa2.79□□□□□ -1.96
COL11A1-205ENST00000447608 CACFD1Q9UGQ2 172 aa2.79□□□□□ -1.96
COL11A1-205ENST00000447608 A0A087WXM4 84 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 FAM25AB3EWG3 89 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 FAM25CB3EWG5 89 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 FAM25GB3EWG6 89 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 M0R2N4 97 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 CD3DP04234 171 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 SPART-AS1P0CW21 52 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 SCGB1A1P11684 91 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 MRPS10P82664 201 aaKnown RBP2.78□□□□□ -1.96
COL11A1-205ENST00000447608 SSBP1Q04837 148 aaKnown RBP2.78□□□□□ -1.96
COL11A1-205ENST00000447608 NMSQ5H8A3 153 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 FOXI2Q6ZQN5 318 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 PHF5AQ7RTV0 110 aaKnown RBP2.78□□□□□ -1.96
COL11A1-205ENST00000447608 RETNLBQ9BQ08 111 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 NAA60Q9H7X0 242 aa2.78□□□□□ -1.96
COL11A1-205ENST00000447608 FAT1Q14517 4588 aa2.78□□□□□ -1.97
COL11A1-205ENST00000447608 PIGBOS1A0A0B4J2F0 54 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 CRYM-AS1A6NIL9 109 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 AKAIN1P0CW23 69 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 RPL35P42766 123 aaKnown RBP2.77□□□□□ -1.97
COL11A1-205ENST00000447608 GDF5OSQ5U4N7 250 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 TMEM229BQ8NBD8 167 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 SMIM4Q8WVI0 70 aa2.77□□□□□ -1.97
COL11A1-205ENST00000447608 A8MTW9 85 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 CFDP00746 253 aaPredicted RBP2.76□□□□□ -1.97
COL11A1-205ENST00000447608 FABP2P12104 132 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 HTN3P15516 51 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 DEFB1P60022 68 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 RAB4BP61018 213 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 PSG9Q00887 426 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 SMCO1Q147U7 214 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 C1orf134Q5TEV5 83 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 OR4B1Q8NGF8 309 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 LINC00052Q96N35 136 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 SLC35B3Q9H1N7 401 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 RPRMQ9NS64 109 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 U3KQ87 197 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 MUC4Q99102 2169 aa2.76□□□□□ -1.97
COL11A1-205ENST00000447608 HERC1Q15751 4861 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 J3KT08 172 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 ARPC5O15511 151 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 GPX1P07203 203 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 ROMO1P60602 79 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 OR8I2Q8N0Y5 310 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 OR2T35Q8NGX2 323 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 TRGV9Q99603 122 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 SCP2D1Q9UJQ7 156 aa2.75□□□□□ -1.97
COL11A1-205ENST00000447608 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 VPS13BQ7Z7G8 4022 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 A0A087WX48 190 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 TRAV12-1A0A0B4J245 112 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 NBDYA0A0U1RRE5 68 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 SNRPGP15A8MWD9 76 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 M0R2Z0 102 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 IAPPP10997 89 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 SLC25A6P12236 298 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 FAUP35544 74 aaKnown RBP2.74□□□□□ -1.97
COL11A1-205ENST00000447608 CCL18P55774 89 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 SPINK13Q1W4C9 94 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.74□□□□□ -1.97
COL11A1-205ENST00000447608 CHCHD1Q96BP2 118 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms