RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SPINK8P0C7L1 97 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 MRPS36P82909 103 aaKnown RBP5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 FOXI1Q12951 378 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 BVES-AS1Q5T3Y7 98 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 C10orf126Q8N4M7 172 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 AMELXQ99217 191 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 MAP1LC3CQ9BXW4 147 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 PRR34Q9NV39 138 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 CSDC2Q9Y534 153 aaKnown RBP5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
SF3A3P1-201ENST00000446317 IGLV4-69A0A075B6H9 119 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 TRAV8-3A0A0A6YYJ7 113 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 C9orf118A6NHY6 69 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 C11orf86A6NJI1 115 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 F8W1H4 67 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 RTL8CO15255 209 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 KRTAP26-1Q6PEX3 210 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 CHAC1Q9BUX1 264 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 SPANXDQ9BXN6 97 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 CDKN2A-AS1Q9UH64 79 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
SF3A3P1-201ENST00000446317 SYS1-DBNDD2H3BUS1 97 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 MIAQ16674 131 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 LINC01620Q4KN68 170 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 TMEM170BQ5T4T1 132 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
SF3A3P1-201ENST00000446317 TOMM7Q9P0U1 55 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 USP17L23D6RBM5 183 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 MALP21145 153 aa5□□□□□ -1.61
SF3A3P1-201ENST00000446317 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 B5MCH6 92 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 COX7A2LO14548 114 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 ZNF22P17026 224 aaPredicted RBP4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 PAPPA-AS1Q5QFB9 102 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 RMI2Q96E14 147 aa4.99□□□□□ -1.61
SF3A3P1-201ENST00000446317 F8VRH5 84 aa4.98□□□□□ -1.61
SF3A3P1-201ENST00000446317 DPM2O94777 84 aa4.98□□□□□ -1.61
SF3A3P1-201ENST00000446317 SLC25A34Q6PIV7 304 aa4.98□□□□□ -1.61
SF3A3P1-201ENST00000446317 CD164L2Q6UWJ8 174 aa4.98□□□□□ -1.61
SF3A3P1-201ENST00000446317 TRAV12-1A0A0B4J245 112 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 TRAV8-4A0A0B4J246 113 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 IGHV3OR16-9A0A0B4J2B5 98 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 TINCRA0A1B0GVN0 87 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 A0A1B0GX51 115 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 IGKCP01834 107 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 FABP2P12104 132 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 C2orf82Q6UX34 121 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 NFE4Q86UQ8 179 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 TM2D2Q9BX73 214 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 PKD1P98161 4303 aa4.97□□□□□ -1.61
SF3A3P1-201ENST00000446317 A0A087WTM6 91 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 LRCOL1A6NCL2 159 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 KRTAP10-2P60368 255 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 HERVK_113P63121 156 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 SPAG11BQ08648 103 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 LINC01545Q5VT33 79 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 Q6Q795 121 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 Q6ZVH6 145 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 ZNF625Q96I27 306 aaPredicted RBP4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 TTTY13Q9BZ97 58 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 TP73-AS1Q9UF72 201 aa4.96□□□□□ -1.62
SF3A3P1-201ENST00000446317 A0A1W2PPM0 123 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 TSPEAR-AS2P59090 65 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
SF3A3P1-201ENST00000446317 A0A087WZ39 114 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 A0A0U1RRA0 63 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 SLPIP03973 132 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 HAMPP81172 84 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 C9orf116Q5BN46 136 aaPredicted RBP4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 UNQ6190/PRO20217Q6UXQ8 127 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 Q8N814 137 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 NTN5Q8WTR8 489 aaPredicted RBP4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 SPANXB1Q9NS25 103 aaPredicted RBP4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGKV2D-26A0A0A0MRZ7 120 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGHV1-58A0A0C4DH39 117 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 PRSS2P07478 247 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 PLNP26678 52 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 NMUP48645 174 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 COX7B2Q8TF08 81 aa4.94□□□□□ -1.62
SF3A3P1-201ENST00000446317 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGLV5-45A0A087WSX0 123 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 J3KT08 172 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 C6orf226Q5I0X4 101 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 Q6ZRU5 148 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 FAM19A3Q7Z5A8 133 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 CAMK2N2Q96S95 79 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 PPDPFQ9H3Y8 114 aa4.93□□□□□ -1.62
SF3A3P1-201ENST00000446317 IGLV5-52A0A0A0MRZ9 124 aa4.92□□□□□ -1.62
SF3A3P1-201ENST00000446317 APOMO95445 188 aa4.92□□□□□ -1.62
SF3A3P1-201ENST00000446317 SEC61GP60059 68 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms