RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 LINC00959A0A1B0GUT2 108 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
UBBP3-201ENST00000445497 M0R2N4 97 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 FXYD4P59646 89 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 CNFNQ9BYD5 112 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 COL4A1P02462 1669 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 KIF26BQ2KJY2 2108 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 BCORQ6W2J9 1755 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 A0A087WYN8 130 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 CPSF4LA6NMK7 179 aaKnown RBP1.6□□□□□ -2.15
UBBP3-201ENST00000445497 IGKV4-1P06312 121 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 ACYP2P14621 99 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 LINC00612Q8N6U2 182 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 Q96NJ1 140 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 ANAPC11Q9NYG5 84 aa1.6□□□□□ -2.15
UBBP3-201ENST00000445497 TNRC6BQ9UPQ9 1833 aaKnown RBP1.6□□□□□ -2.15
UBBP3-201ENST00000445497 DLEC1Q9Y238 1755 aa1.59□□□□□ -2.15
UBBP3-201ENST00000445497 SHROOM3Q8TF72 1996 aa1.59□□□□□ -2.15
UBBP3-201ENST00000445497 MED12Q93074 2177 aa1.59□□□□□ -2.15
UBBP3-201ENST00000445497 MDC1Q14676 2089 aaKnown RBP1.59□□□□□ -2.15
UBBP3-201ENST00000445497 NCOA6Q14686 2063 aaPredicted RBP1.59□□□□□ -2.15
UBBP3-201ENST00000445497 H3BRN7 92 aa1.59□□□□□ -2.15
UBBP3-201ENST00000445497 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
UBBP3-201ENST00000445497 C4AP0C0L4 1744 aa1.59□□□□□ -2.16
UBBP3-201ENST00000445497 CR1P17927 2039 aa1.59□□□□□ -2.16
UBBP3-201ENST00000445497 PCDH15Q96QU1 1955 aa1.58□□□□□ -2.16
UBBP3-201ENST00000445497 SLPIP03973 132 aa1.58□□□□□ -2.16
UBBP3-201ENST00000445497 Q6ZQY7 126 aa1.58□□□□□ -2.16
UBBP3-201ENST00000445497 LINC00308Q8TCZ7 52 aa1.58□□□□□ -2.16
UBBP3-201ENST00000445497 DNAJC13O75165 2243 aa1.58□□□□□ -2.16
UBBP3-201ENST00000445497 TET1Q8NFU7 2136 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 TFF3Q07654 80 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 TPRXLQ17RH7 258 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 SPINK14Q6IE38 97 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 MAPK1IP1LQ8NDC0 245 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 ARHGAP5-AS1Q96IT6 56 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 ARFGEF3Q5TH69 2177 aa1.57□□□□□ -2.16
UBBP3-201ENST00000445497 IGKV2D-24A0A075B6R9 120 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 SPTY2D1-AS1A0A0U1RR47 76 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 NDUFA1O15239 70 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 LY6G6CO95867 125 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 IAPPP10997 89 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 KRTAP24-1Q3LI83 254 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 C10orf99Q6UWK7 81 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 Q8N9L7 120 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 LINC00304Q8N9R0 145 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 SPACA4Q8TDM5 124 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 NRAPQ86VF7 1730 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 CACNA1DQ01668 2161 aa1.56□□□□□ -2.16
UBBP3-201ENST00000445497 ARHGAP32A7KAX9 2087 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 CACNA1IQ9P0X4 2223 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 A0A0G2JMZ2 1700 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 LRRC37A2A6NM11 1700 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 LRRC37AA6NMS7 1700 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 C4BP0C0L5 1744 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
UBBP3-201ENST00000445497 LINC00158P58513 81 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 LINC00315P59091 139 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 KRTAP11-1Q8IUC1 163 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 SMIM11BQ8TCY0 68 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 PLAC4Q8WY50 150 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 CCL19Q99731 98 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 ABCA4P78363 2273 aa1.55□□□□□ -2.16
UBBP3-201ENST00000445497 NUP214P35658 2090 aaPredicted RBP1.54□□□□□ -2.16
UBBP3-201ENST00000445497 CRIP1P50238 77 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 KRTAP10-2P60368 255 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 Q6ZRX8 168 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 SSBP3-AS1Q7Z2R9 100 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 Q8IZM0 81 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 COL4A5P29400 1685 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 ZNF318Q5VUA4 2279 aa1.54□□□□□ -2.16
UBBP3-201ENST00000445497 IGKV2-28A0A075B6P5 120 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 IGKV2D-28P01615 120 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 SPINK13Q1W4C9 94 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 C14orf177Q52M58 125 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 LINC01590Q5TEZ4 76 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 COX6B2Q6YFQ2 88 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 TP53AIP1Q9HCN2 124 aa1.53□□□□□ -2.16
UBBP3-201ENST00000445497 TNCP24821 2201 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 SDK1Q7Z5N4 2213 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 DOCK10Q96BY6 2186 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 ESPL1Q14674 2120 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 IGKV2-24A0A0C4DH68 120 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 PP632Q6XCG6 107 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 RPS27LQ71UM5 84 aaKnown RBP1.52□□□□□ -2.17
UBBP3-201ENST00000445497 RP1P56715 2156 aa1.52□□□□□ -2.17
UBBP3-201ENST00000445497 UNC13CQ8NB66 2214 aa1.51□□□□□ -2.17
UBBP3-201ENST00000445497 KMT2BQ9UMN6 2715 aaPredicted RBP1.51□□□□□ -2.17
UBBP3-201ENST00000445497 A0A096LNT2 108 aa1.51□□□□□ -2.17
UBBP3-201ENST00000445497 LYNX1G3V0Z9 82 aa1.51□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP7-1Q8IUC3 87 aa1.51□□□□□ -2.17
UBBP3-201ENST00000445497 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
UBBP3-201ENST00000445497 COL5A1P20908 1838 aaPredicted RBP1.51□□□□□ -2.17
UBBP3-201ENST00000445497 COL27A1Q8IZC6 1860 aaPredicted RBP1.5□□□□□ -2.17
UBBP3-201ENST00000445497 GVQW2A0A096LPI5 108 aaPredicted RBP1.5□□□□□ -2.17
UBBP3-201ENST00000445497 LOC100996750A0A140TA64 210 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 LOC730098B7Z3J9 87 aa1.5□□□□□ -2.17
UBBP3-201ENST00000445497 KRTAP19-1Q8IUB9 90 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms