RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CD28P10747 220 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 HTN1P15515 57 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 CRYBA4P53673 196 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 RPL39P62891 51 aaKnown RBP2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 COTL1Q14019 142 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 DEFB114Q30KQ6 69 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 OCIAD2Q56VL3 154 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 PLEKHB2Q96CS7 222 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 VPS25Q9BRG1 176 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 TTTY13Q9BZ97 58 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 SPANXB1Q9NS25 103 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 SPANXA1Q9NS26 97 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 ABCA12Q86UK0 2595 aa2.3□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGHV3-73A0A0B4J1V6 119 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGLL5B9A064 214 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 J3QQQ9 107 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 J3QR89 54 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 K7ERJ3 54 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 LEPROTO15243 131 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 EMP1P54849 157 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 RRN3P1Q2M238 152 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 C12orf74Q32Q52 190 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 MORN3Q6PF18 240 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 ST20-AS1Q8NBB2 130 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 WFDC11Q8NEX6 87 aa2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZNF418Q8TF45 676 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZNF469Q96JG9 3925 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 A0A0J9YY99 117 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 TRBV10-1A0A0K0K1A3 114 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 F8W1H4 67 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 J3QKU1 62 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 PFN2P35080 140 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 RBX1P62877 108 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 FAM222AQ5U5X8 452 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 CFAP126Q5VTH2 177 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 ZNRF2Q8NHG8 242 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 TMEM263Q8WUH6 116 aaKnown RBP2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 TIMM21Q9BVV7 248 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 C16orf95Q9H693 158 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 CSMD2Q7Z408 3487 aa2.28□□□□□ -2.04
HMGB3P6-201ENST00000444896 ANK3Q12955 4377 aaKnown RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 TLN2Q9Y4G6 2542 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 CELSR2Q9HCU4 2923 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 MAP1AP78559 2803 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 TRBV20-1A0A075B6N2 111 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGHV1-58A0A0C4DH39 117 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 LOC107984156A0A0G2JMH3 177 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 TINCRA0A1B0GVN0 87 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 UBE2L6O14933 153 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 APOMO95445 188 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGHV3-30P01768 117 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 P0DMU3 169 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 FAM231AP0DMU4 169 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 FAM231CP0DMU5 169 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGHV3-30-5P0DP03 117 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 ZNF22P17026 224 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 UBE2D1P51668 147 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 TSPEAR-AS2P59090 65 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 HERVK_113P63121 156 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 MRPS36P82909 103 aaKnown RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 DAZ4Q86SG3 579 aaKnown RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 ARL17AQ8IVW1 177 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 SLC25A29Q8N8R3 303 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 ATP6V0E2Q8NHE4 81 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 DEFB104AQ8WTQ1 72 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 AMELXQ99217 191 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 UTP20O75691 2785 aaKnown RBP2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 CENPEQ02224 2701 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 SORL1Q92673 2214 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 ITPR3Q14573 2671 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 CELSR1Q9NYQ6 3014 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 CRYBG3Q68DQ2 2970 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 FBN2P35556 2912 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 ZANQ9Y493 2812 aa2.27□□□□□ -2.05
HMGB3P6-201ENST00000444896 SONP18583 2426 aaKnown RBP2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGHV3-64A0A075B6Q5 118 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 TRGV2A0A075B6R0 118 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 H3BMG7 143 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGLV1-51P01701 117 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 SCGB1C2P0DMR2 95 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 IGHV3-30-3P0DP02 117 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 PSMB2P49721 201 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 UBE2D3P61077 147 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 UBE2D2P62837 147 aa2.26□□□□□ -2.05
HMGB3P6-201ENST00000444896 CIRBPQ14011 172 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms