RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 C5orf38Q86SI9 138 aa6.44□□□□□ -1.38
SMPD4P1-203ENST00000443839 APLNQ9ULZ1 77 aa6.44□□□□□ -1.38
SMPD4P1-203ENST00000443839 A0A087WZ39 114 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 UBE2DNLQ8IWF7 75 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 IGLV5-39A0A0G2JS06 123 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 COX7A2LO14548 114 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 SEC61GP60059 68 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 MIAQ16674 131 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 DNAH7Q8WXX0 4024 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
SMPD4P1-203ENST00000443839 LYSTQ99698 3801 aa6.42□□□□□ -1.38
SMPD4P1-203ENST00000443839 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
SMPD4P1-203ENST00000443839 M0QXV9 152 aa6.42□□□□□ -1.38
SMPD4P1-203ENST00000443839 ZFAND6Q6FIF0 208 aa6.42□□□□□ -1.38
SMPD4P1-203ENST00000443839 F8W1H4 67 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 MALP21145 153 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 Q9H8V8 135 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 GAGE12HA6NDE8 117 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
SMPD4P1-203ENST00000443839 FOXI1Q12951 378 aa6.4□□□□□ -1.38
SMPD4P1-203ENST00000443839 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 A0A1B0GV72 72 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 H3BMG7 143 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 SRSF9Q13242 221 aaKnown RBP eCLIP6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 C10orf126Q8N4M7 172 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 COX7B2Q8TF08 81 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 Q9HAA7 133 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 SPANXB1Q9NS25 103 aaPredicted RBP6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
SMPD4P1-203ENST00000443839 NDUFA1O15239 70 aa6.39□□□□□ -1.39
SMPD4P1-203ENST00000443839 WFDC2Q14508 124 aa6.39□□□□□ -1.39
SMPD4P1-203ENST00000443839 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
SMPD4P1-203ENST00000443839 IGKV2D-24A0A075B6R9 120 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 PRSS2P07478 247 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 MUC7Q8TAX7 377 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 APOMO95445 188 aa6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 PLECQ15149 4684 aaKnown RBP6.38□□□□□ -1.39
SMPD4P1-203ENST00000443839 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
SMPD4P1-203ENST00000443839 TSPAN13O95857 204 aa6.37□□□□□ -1.39
SMPD4P1-203ENST00000443839 Q8IZM0 81 aa6.37□□□□□ -1.39
SMPD4P1-203ENST00000443839 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
SMPD4P1-203ENST00000443839 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
SMPD4P1-203ENST00000443839 CKS1BP61024 79 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 RMI2Q96E14 147 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 SPAG11BQ08648 103 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 CIRBPQ14011 172 aaKnown RBP6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 MEIG1Q5JSS6 88 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
SMPD4P1-203ENST00000443839 J3QR89 54 aa6.34□□□□□ -1.39
SMPD4P1-203ENST00000443839 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
SMPD4P1-203ENST00000443839 CFC1P0CG37 223 aa6.34□□□□□ -1.39
SMPD4P1-203ENST00000443839 MTURNQ8N3F0 131 aa6.34□□□□□ -1.39
SMPD4P1-203ENST00000443839 LYRM7Q5U5X0 104 aa6.34□□□□□ -1.4
SMPD4P1-203ENST00000443839 C2orf82Q6UX34 121 aa6.34□□□□□ -1.4
SMPD4P1-203ENST00000443839 KRTAP1-5Q9BYS1 174 aa6.34□□□□□ -1.4
SMPD4P1-203ENST00000443839 TIMM17BO60830 172 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 CXCL5P42830 114 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 TTC32Q5I0X7 151 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 LITAFQ99732 161 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
SMPD4P1-203ENST00000443839 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 PSMB2P49721 201 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 HIGD2BQ4VC39 106 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 DAND5Q8N907 189 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
SMPD4P1-203ENST00000443839 TRBV20-1A0A075B6N2 111 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 TCL1BO95988 128 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 PFN2P35080 140 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 LINC00158P58513 81 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
SMPD4P1-203ENST00000443839 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
SMPD4P1-203ENST00000443839 PSCAO43653 123 aa6.3□□□□□ -1.4
SMPD4P1-203ENST00000443839 NPC2P61916 151 aa6.3□□□□□ -1.4
SMPD4P1-203ENST00000443839 CASC10Q5T4H9 136 aa6.3□□□□□ -1.4
SMPD4P1-203ENST00000443839 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
SMPD4P1-203ENST00000443839 MUSTN1Q8IVN3 82 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 NTN5Q8WTR8 489 aaPredicted RBP6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 SIGMAR1Q99720 223 aa6.29□□□□□ -1.4
SMPD4P1-203ENST00000443839 GVQW2A0A096LPI5 108 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms