RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 TMEM141Q96I45 108 aa12.09□□□□□ -0.47
POLR2J3-202ENST00000443430 S100PP25815 95 aa12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 RPL28P46779 137 aaKnown RBP12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 LBHQ53QV2 105 aaPredicted RBP12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 C2orf66Q6UXQ4 117 aa12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 LINC00469Q8N7U9 141 aa12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
POLR2J3-202ENST00000443430 TEX43Q6ZNM6 134 aa12.07□□□□□ -0.48
POLR2J3-202ENST00000443430 NXT2Q9NPJ8 142 aaKnown RBP12.07□□□□□ -0.48
POLR2J3-202ENST00000443430 ANAPC11Q9NYG5 84 aa12.07□□□□□ -0.48
POLR2J3-202ENST00000443430 TRAV9-1A0A075B6T8 112 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 BCE1O60756 84 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 ZC2HC1BQ5TFG8 222 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 Q6ZN92 141 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
POLR2J3-202ENST00000443430 K7EMI3 77 aa12.03□□□□□ -0.48
POLR2J3-202ENST00000443430 MRPL55Q7Z7F7 128 aaKnown RBP12.03□□□□□ -0.48
POLR2J3-202ENST00000443430 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
POLR2J3-202ENST00000443430 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
POLR2J3-202ENST00000443430 VCX2Q9H322 139 aa12.02□□□□□ -0.49
POLR2J3-202ENST00000443430 IGLV7-46A0A075B6I9 117 aa12.01□□□□□ -0.49
POLR2J3-202ENST00000443430 CKS1BP61024 79 aa12.01□□□□□ -0.49
POLR2J3-202ENST00000443430 LINC00304Q8N9R0 145 aa12.01□□□□□ -0.49
POLR2J3-202ENST00000443430 RPS10P5Q9NQ39 176 aa12.01□□□□□ -0.49
POLR2J3-202ENST00000443430 TOMM7Q9P0U1 55 aa12.01□□□□□ -0.49
POLR2J3-202ENST00000443430 PRSS2P07478 247 aa12□□□□□ -0.49
POLR2J3-202ENST00000443430 AMELXQ99217 191 aa12□□□□□ -0.49
POLR2J3-202ENST00000443430 GNB1LQ9BYB4 327 aa12□□□□□ -0.49
POLR2J3-202ENST00000443430 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
POLR2J3-202ENST00000443430 G0S2P27469 103 aa11.99□□□□□ -0.49
POLR2J3-202ENST00000443430 RHEBQ15382 184 aa11.99□□□□□ -0.49
POLR2J3-202ENST00000443430 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
POLR2J3-202ENST00000443430 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
POLR2J3-202ENST00000443430 Q8IZM0 81 aa11.98□□□□□ -0.49
POLR2J3-202ENST00000443430 RPL37AP8A6NKH3 93 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 NPSP0C0P6 89 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 FSIP2Q5CZC0 6907 aa11.97□□□□□ -0.49
POLR2J3-202ENST00000443430 FABP9Q0Z7S8 132 aa11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 COX19Q49B96 90 aa11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 KRTAP13-1Q8IUC0 172 aa11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 ALKBH7Q9BT30 221 aaPredicted RBP11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 MRPL18Q9H0U6 180 aaKnown RBP11.96□□□□□ -0.49
POLR2J3-202ENST00000443430 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-202ENST00000443430 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
POLR2J3-202ENST00000443430 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
POLR2J3-202ENST00000443430 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
POLR2J3-202ENST00000443430 ERASQ7Z444 233 aa11.93□□□□□ -0.5
POLR2J3-202ENST00000443430 GEMIN7Q9H840 131 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-202ENST00000443430 SMCO4Q9NRQ5 59 aa11.93□□□□□ -0.5
POLR2J3-202ENST00000443430 F8VRH5 84 aa11.92□□□□□ -0.5
POLR2J3-202ENST00000443430 HERVK_113P63121 156 aa11.92□□□□□ -0.5
POLR2J3-202ENST00000443430 PPDPFQ9H3Y8 114 aa11.92□□□□□ -0.5
POLR2J3-202ENST00000443430 GAGE10A6NGK3 116 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 APOC3P02656 99 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 UBE2AP49459 152 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 SEC11AP67812 179 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 CTAG1AP78358 180 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
POLR2J3-202ENST00000443430 IGKV2D-26A0A0A0MRZ7 120 aa11.89□□□□□ -0.51
POLR2J3-202ENST00000443430 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
POLR2J3-202ENST00000443430 CRCT1Q9UGL9 99 aa11.89□□□□□ -0.51
POLR2J3-202ENST00000443430 LINC01546A6NGU7 62 aa11.88□□□□□ -0.51
POLR2J3-202ENST00000443430 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
POLR2J3-202ENST00000443430 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
POLR2J3-202ENST00000443430 SNAPINO95295 136 aa11.87□□□□□ -0.51
POLR2J3-202ENST00000443430 SVBPQ8N300 66 aa11.86□□□□□ -0.51
POLR2J3-202ENST00000443430 IGLV5-37A0A075B6J1 123 aa11.85□□□□□ -0.51
POLR2J3-202ENST00000443430 CXCL5P42830 114 aa11.85□□□□□ -0.51
POLR2J3-202ENST00000443430 LINC01547P58512 204 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-202ENST00000443430 TINCRA0A1B0GVN0 87 aa11.84□□□□□ -0.51
POLR2J3-202ENST00000443430 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
POLR2J3-202ENST00000443430 PMVKQ15126 192 aa11.83□□□□□ -0.52
POLR2J3-202ENST00000443430 C18orf32Q8TCD1 76 aa11.82□□□□□ -0.52
POLR2J3-202ENST00000443430 SMIM1B2RUZ4 78 aa11.81□□□□□ -0.52
POLR2J3-202ENST00000443430 NDUFA6P56556 154 aa11.81□□□□□ -0.52
POLR2J3-202ENST00000443430 PRLHP81277 87 aa11.81□□□□□ -0.52
POLR2J3-202ENST00000443430 C3orf22Q8N5N4 141 aa11.81□□□□□ -0.52
POLR2J3-202ENST00000443430 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
POLR2J3-202ENST00000443430 IGKV2-28A0A075B6P5 120 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 SCO1O75880 301 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 IGKV2D-28P01615 120 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 KRTAP4-1Q9BYQ7 146 aa11.8□□□□□ -0.52
POLR2J3-202ENST00000443430 LINC00614P0C842 121 aa11.79□□□□□ -0.52
POLR2J3-202ENST00000443430 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
POLR2J3-202ENST00000443430 PDZD11Q5EBL8 140 aa11.79□□□□□ -0.52
POLR2J3-202ENST00000443430 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
POLR2J3-202ENST00000443430 URB1-AS1Q96HZ7 61 aa11.79□□□□□ -0.52
POLR2J3-202ENST00000443430 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms