RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
MCF2L-218ENST00000442625 HIST2H2BCQ6DN03 193 aa9.96□□□□□ -0.81
MCF2L-218ENST00000442625 WFDC10AQ9H1F0 79 aa9.96□□□□□ -0.81
MCF2L-218ENST00000442625 LINC00158P58513 81 aa9.96□□□□□ -0.82
MCF2L-218ENST00000442625 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
MCF2L-218ENST00000442625 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
MCF2L-218ENST00000442625 CRPP02741 224 aa9.95□□□□□ -0.82
MCF2L-218ENST00000442625 UBE2L6O14933 153 aa9.95□□□□□ -0.82
MCF2L-218ENST00000442625 C16orf95Q9H693 158 aa9.94□□□□□ -0.82
MCF2L-218ENST00000442625 A0A087WVE0 104 aa9.94□□□□□ -0.82
MCF2L-218ENST00000442625 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
MCF2L-218ENST00000442625 ATOX1O00244 68 aa9.93□□□□□ -0.82
MCF2L-218ENST00000442625 NCR3O14931 201 aa9.93□□□□□ -0.82
MCF2L-218ENST00000442625 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
MCF2L-218ENST00000442625 COX7B2Q8TF08 81 aa9.93□□□□□ -0.82
MCF2L-218ENST00000442625 TRGV2A0A075B6R0 118 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 H3BS24 57 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 LECT2O14960 151 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 DNAL4O96015 105 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
MCF2L-218ENST00000442625 CCL18P55774 89 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
MCF2L-218ENST00000442625 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 CCL24O00175 119 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 COPS9Q8WXC6 57 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
MCF2L-218ENST00000442625 GCN1Q92616 2671 aaKnown RBP9.9□□□□□ -0.82
MCF2L-218ENST00000442625 FAM19A3Q7Z5A8 133 aa9.9□□□□□ -0.82
MCF2L-218ENST00000442625 C11orf45Q8TAV5 145 aa9.9□□□□□ -0.82
MCF2L-218ENST00000442625 EPM2AB3EWF7 344 aa9.9□□□□□ -0.83
MCF2L-218ENST00000442625 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.83
MCF2L-218ENST00000442625 DEFB113Q30KQ7 82 aa9.9□□□□□ -0.83
MCF2L-218ENST00000442625 PAX4O43316 350 aa9.89□□□□□ -0.83
MCF2L-218ENST00000442625 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
MCF2L-218ENST00000442625 APCP25054 2843 aa9.89□□□□□ -0.83
MCF2L-218ENST00000442625 DNAJC9-AS1A6NH13 148 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 HILS1P60008 231 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
MCF2L-218ENST00000442625 FAM222AQ5U5X8 452 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 SERP1Q9Y6X1 66 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 ITPR3Q14573 2671 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
MCF2L-218ENST00000442625 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
MCF2L-218ENST00000442625 SMIM26A0A096LP01 95 aa9.87□□□□□ -0.83
MCF2L-218ENST00000442625 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
MCF2L-218ENST00000442625 MTORP42345 2549 aa9.87□□□□□ -0.83
MCF2L-218ENST00000442625 NDUFC2-KCTD14E9PQ53 114 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 ESM1Q9NQ30 184 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 WFDC9Q8NEX5 89 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 UBR5O95071 2799 aaPredicted RBP9.86□□□□□ -0.83
MCF2L-218ENST00000442625 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
MCF2L-218ENST00000442625 CXCL5P42830 114 aa9.84□□□□□ -0.83
MCF2L-218ENST00000442625 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
MCF2L-218ENST00000442625 ACANP16112 2415 aa9.84□□□□□ -0.83
MCF2L-218ENST00000442625 KRTAP1-3Q8IUG1 177 aa9.84□□□□□ -0.84
MCF2L-218ENST00000442625 FLNAP21333 2647 aaKnown RBP9.83□□□□□ -0.84
MCF2L-218ENST00000442625 XCL1P47992 114 aa9.83□□□□□ -0.84
MCF2L-218ENST00000442625 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
MCF2L-218ENST00000442625 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
MCF2L-218ENST00000442625 A0A096LPF7 62 aa9.82□□□□□ -0.84
MCF2L-218ENST00000442625 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
MCF2L-218ENST00000442625 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
MCF2L-218ENST00000442625 SS18Q15532 418 aa9.82□□□□□ -0.84
MCF2L-218ENST00000442625 FP248Q71RG6 208 aaPredicted RBP9.82□□□□□ -0.84
MCF2L-218ENST00000442625 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
MCF2L-218ENST00000442625 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
MCF2L-218ENST00000442625 Q6ZRU5 148 aa9.81□□□□□ -0.84
MCF2L-218ENST00000442625 TRBV6-8A0A0A6YYG3 113 aa9.8□□□□□ -0.84
MCF2L-218ENST00000442625 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
MCF2L-218ENST00000442625 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
MCF2L-218ENST00000442625 FHL2Q14192 279 aa9.8□□□□□ -0.84
MCF2L-218ENST00000442625 H0YGX0 51 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 C19orf73Q9NVV2 129 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 A0A087WZ39 114 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 PRR15Q8IV56 129 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
MCF2L-218ENST00000442625 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.84
MCF2L-218ENST00000442625 LINC01006Q8NI28 216 aa9.77□□□□□ -0.84
MCF2L-218ENST00000442625 USP17L23D6RBM5 183 aa9.77□□□□□ -0.85
MCF2L-218ENST00000442625 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-218ENST00000442625 Q6JHZ5 121 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 Q8N3U1 123 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 APOC4P55056 127 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 ZNF843Q8N446 348 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 ORMDL1Q9P0S3 153 aa9.76□□□□□ -0.85
MCF2L-218ENST00000442625 IGLV1-51P01701 117 aa9.75□□□□□ -0.85
MCF2L-218ENST00000442625 NANOS2P60321 138 aaKnown RBP9.75□□□□□ -0.85
MCF2L-218ENST00000442625 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
MCF2L-218ENST00000442625 TRAV23DV6A0A075B6W5 121 aa9.74□□□□□ -0.85
MCF2L-218ENST00000442625 Q8NDZ9 215 aa9.73□□□□□ -0.85
MCF2L-218ENST00000442625 GYPEP15421 78 aa9.73□□□□□ -0.85
MCF2L-218ENST00000442625 VWFP04275 2813 aa9.72□□□□□ -0.85
MCF2L-218ENST00000442625 CCKP06307 115 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms