RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 Q8N3U1 123 aa5.37□□□□□ -1.55
LMO3-208ENST00000441439 MGAQ8IWI9 3026 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 LINC01356Q8N9X3 169 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 CSNK1G2-AS1Q8NCQ2 148 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 CCL19Q99731 98 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 EP300Q09472 2414 aaPredicted RBP5.36□□□□□ -1.55
LMO3-208ENST00000441439 NREPQ16612 68 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 LAMTOR3Q9UHA4 124 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
LMO3-208ENST00000441439 GVQW2A0A096LPI5 108 aaPredicted RBP5.35□□□□□ -1.55
LMO3-208ENST00000441439 M0R2N4 97 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 SPATA3Q8NHX4 192 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 NOP10Q9NPE3 64 aaKnown RBP5.35□□□□□ -1.55
LMO3-208ENST00000441439 A0A0J9YWU9 116 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 IGHV4-30-4P0DP06 118 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 TM2D3Q9BRN9 247 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 A0A1B0GW54 56 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 RPL35AP18077 110 aaKnown RBP5.35□□□□□ -1.55
LMO3-208ENST00000441439 Q6ZTC4 211 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 Q8NDZ9 215 aa5.35□□□□□ -1.55
LMO3-208ENST00000441439 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
LMO3-208ENST00000441439 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
LMO3-208ENST00000441439 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
LMO3-208ENST00000441439 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.55
LMO3-208ENST00000441439 UBR5O95071 2799 aaPredicted RBP5.34□□□□□ -1.56
LMO3-208ENST00000441439 CELSR1Q9NYQ6 3014 aa5.33□□□□□ -1.56
LMO3-208ENST00000441439 TPRP12270 2363 aaKnown RBP5.33□□□□□ -1.56
LMO3-208ENST00000441439 PRR15Q8IV56 129 aa5.33□□□□□ -1.56
LMO3-208ENST00000441439 BPY2O14599 106 aa5.33□□□□□ -1.56
LMO3-208ENST00000441439 COX7BP24311 80 aa5.33□□□□□ -1.56
LMO3-208ENST00000441439 SPTBN1Q01082 2364 aaKnown RBP5.32□□□□□ -1.56
LMO3-208ENST00000441439 TRGV4A0A0C4DH28 118 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 PRYO14603 147 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 HAMPP81172 84 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 ESRGQ1W209 222 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 LINC00474Q9P2X8 69 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 IGKV4-1P06312 121 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 DEFB136Q30KP8 78 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 ZNF843Q8N446 348 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 PRR3P79522 188 aaKnown RBP5.32□□□□□ -1.56
LMO3-208ENST00000441439 Q1T7F1 81 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
LMO3-208ENST00000441439 RP1L1Q8IWN7 2480 aaPredicted RBP5.32□□□□□ -1.56
LMO3-208ENST00000441439 ELOF1P60002 83 aaKnown RBP5.31□□□□□ -1.56
LMO3-208ENST00000441439 V9GYY9 64 aa5.31□□□□□ -1.56
LMO3-208ENST00000441439 Q6ZRU5 148 aa5.31□□□□□ -1.56
LMO3-208ENST00000441439 DNAH3Q8TD57 4116 aa5.3□□□□□ -1.56
LMO3-208ENST00000441439 GNLYP22749 145 aa5.3□□□□□ -1.56
LMO3-208ENST00000441439 FAM229BQ4G0N7 80 aa5.3□□□□□ -1.56
LMO3-208ENST00000441439 Q6ZQY7 126 aa5.3□□□□□ -1.56
LMO3-208ENST00000441439 WFDC11Q8NEX6 87 aa5.29□□□□□ -1.56
LMO3-208ENST00000441439 DIRC1Q969H9 104 aa5.29□□□□□ -1.56
LMO3-208ENST00000441439 C11orf68Q9H3H3 251 aaKnown RBP5.29□□□□□ -1.56
LMO3-208ENST00000441439 RELNP78509 3460 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 IGKV3OR2-268A0A0C4DH90 116 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 hDV103S1A0JD37 113 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
LMO3-208ENST00000441439 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
LMO3-208ENST00000441439 MAP1BP46821 2468 aaKnown RBP5.28□□□□□ -1.56
LMO3-208ENST00000441439 ACACAQ13085 2346 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 SEC61GP60059 68 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
LMO3-208ENST00000441439 SVEP1Q4LDE5 3571 aa5.28□□□□□ -1.56
LMO3-208ENST00000441439 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
LMO3-208ENST00000441439 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
LMO3-208ENST00000441439 PKIGQ9Y2B9 76 aa5.27□□□□□ -1.57
LMO3-208ENST00000441439 ZNF73O43830 326 aaPredicted RBP5.26□□□□□ -1.57
LMO3-208ENST00000441439 IGLV1-51P01701 117 aa5.26□□□□□ -1.57
LMO3-208ENST00000441439 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
LMO3-208ENST00000441439 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
LMO3-208ENST00000441439 CACNA1HO95180 2353 aa5.26□□□□□ -1.57
LMO3-208ENST00000441439 PRR34Q9NV39 138 aa5.26□□□□□ -1.57
LMO3-208ENST00000441439 GYPEP15421 78 aa5.25□□□□□ -1.57
LMO3-208ENST00000441439 PTPRQQ9UMZ3 2332 aa5.25□□□□□ -1.57
LMO3-208ENST00000441439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.25□□□□□ -1.57
LMO3-208ENST00000441439 REG3AQ06141 175 aa5.25□□□□□ -1.57
LMO3-208ENST00000441439 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
LMO3-208ENST00000441439 RNASE1P07998 156 aaKnown RBP5.24□□□□□ -1.57
LMO3-208ENST00000441439 KRTAP1-1Q07627 177 aa5.24□□□□□ -1.57
LMO3-208ENST00000441439 C9orf116Q5BN46 136 aaPredicted RBP5.24□□□□□ -1.57
LMO3-208ENST00000441439 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
LMO3-208ENST00000441439 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
LMO3-208ENST00000441439 COL6A6A6NMZ7 2263 aa5.24□□□□□ -1.57
LMO3-208ENST00000441439 ASH1LQ9NR48 2969 aaKnown RBP5.23□□□□□ -1.57
LMO3-208ENST00000441439 BBC3Q96PG8 261 aaPredicted RBP5.23□□□□□ -1.57
LMO3-208ENST00000441439 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 CACNA1AO00555 2505 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 VPREB1P12018 145 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 LYRM9A8MSI8 78 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 FBN2P35556 2912 aa5.23□□□□□ -1.57
LMO3-208ENST00000441439 CYSRT1A8MQ03 144 aa5.22□□□□□ -1.57
LMO3-208ENST00000441439 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
LMO3-208ENST00000441439 M0R378 163 aa5.22□□□□□ -1.57
LMO3-208ENST00000441439 SORL1Q92673 2214 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms