RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 MRPS16Q9Y3D3 137 aaKnown RBP3.15□□□□□ -1.91
PTPN4-206ENST00000441089 A0A087WTM6 91 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 A0A087WX48 190 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 IGLV5-52A0A0A0MRZ9 124 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 TRAV8-6A0A0B4J262 113 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 A0A1B0GUV1 79 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 LINC01549A6NIU2 74 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 TMEM262E9PQX1 116 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 PRSS1P07477 247 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 ZNF25P17030 456 aaPredicted RBP3.14□□□□□ -1.91
PTPN4-206ENST00000441089 UBE2D1P51668 147 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 PMVKQ15126 192 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 LINC01556Q5JQF7 62 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 AMMECR1LQ6DCA0 310 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 ATOH7Q8N100 152 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 ZNF664Q8N3J9 261 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 UPK3BQ9BT76 320 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 MRPL35Q9NZE8 188 aaKnown RBP3.14□□□□□ -1.91
PTPN4-206ENST00000441089 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
PTPN4-206ENST00000441089 TRAV13-1A0A0B4J241 112 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 C11orf86A6NJI1 115 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 F8VRH5 84 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
PTPN4-206ENST00000441089 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 IGLC3P0DOY3 106 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 COX6A2Q02221 97 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 MAJINQ3KP22 176 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 LINC00242Q5T6M2 205 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 DGAT2L7PQ6IED9 249 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 ENHOQ6UWT2 76 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 TEX43Q6ZNM6 134 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 FAM19A3Q7Z5A8 133 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 TMEM101Q96IK0 257 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 VCX2Q9H322 139 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
PTPN4-206ENST00000441089 CHTOPQ9Y3Y2 248 aaKnown RBP3.13□□□□□ -1.91
PTPN4-206ENST00000441089 IGLV5-45A0A087WSX0 123 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 LINC00959A0A1B0GUT2 108 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 hDV102S1A0JD36 115 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 SCGB1D1O95968 90 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 SMIM6P0DI80 62 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 ZNF22P17026 224 aaPredicted RBP3.12□□□□□ -1.91
PTPN4-206ENST00000441089 PKIAP61925 76 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 REG3AQ06141 175 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 PAPPA-AS1Q5QFB9 102 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 DNAH8Q96JB1 4490 aa3.12□□□□□ -1.91
PTPN4-206ENST00000441089 IGLV10-54A0A075B6I4 117 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 TINCRA0A1B0GVN0 87 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 C20orf202A1L168 122 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 SIVA1O15304 175 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 CCL25O15444 150 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 DPM2O94777 84 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 IGKCP01834 107 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
PTPN4-206ENST00000441089 SMAGPQ0VAQ4 97 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 LINC00518Q8N0U6 118 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 STPG4Q8N801 248 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 UBE2WQ96B02 151 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 C2orf88Q9BSF0 95 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 TP73-AS1Q9UF72 201 aa3.11□□□□□ -1.91
PTPN4-206ENST00000441089 TRAV9-2A0A087WT02 112 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 TRAV8-3A0A0A6YYJ7 113 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 TMEM223A0PJW6 202 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 IBA57-AS1B1ANH7 110 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 SPINK8P0C7L1 97 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 PLNP26678 52 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 XCL1P47992 114 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 TSPEAR-AS2P59090 65 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 TMEM170BQ5T4T1 132 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 Q6ZSA8 131 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 C5orf38Q86SI9 138 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 CHCHD10Q8WYQ3 142 aaPredicted RBP3.1□□□□□ -1.91
PTPN4-206ENST00000441089 C12orf57Q99622 126 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 TTTY13Q9BZ97 58 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 CDKN2A-AS1Q9UH64 79 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 PAM16Q9Y3D7 125 aa3.1□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3-64A0A075B6Q5 118 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 SMIM1B2RUZ4 78 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 CRPP02741 224 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 HERVK_113P63121 156 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 SEC11AP67812 179 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 SS18Q15532 418 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 CD164L2Q6UWJ8 174 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
PTPN4-206ENST00000441089 Q9HAA7 133 aa3.09□□□□□ -1.91
PTPN4-206ENST00000441089 A0A087WZ39 114 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 TRAV8-4A0A0B4J246 113 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 IGHV1-58A0A0C4DH39 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms